Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DTNA	Gene	0	43.57	77.37	4.49	4.95	41.97	8.02	10.68
2	399108	Transcript	0	0	0	0	0	0	0	0
3	315456	Transcript	0	0	0	0	0	0	0	0
4	399111	Transcript	0	0	0	0	0	0	0	0
5	283365	Transcript	0	0	0	0	0	0	0	0
6	399121	Transcript	0	0	0	0	0	0	0	0
7	399097	Transcript	0	0	0	0	0	0	0	0
8	399114	Transcript	1	0.53	0.52	0.00	0.00	0.74	8.26	0.06
9	348997	Transcript	0	2.03	0.61	0.85	1.65	0.19	2.13	1.56
10	269191	Transcript	0	0	0	0	0	0	0	0
11	269190	Transcript	0	0	0	0	0	0	0	0
12	399119	Transcript	0	2.77	7.33	0.23	0.25	2.13	0.65	2.27
13	399113	Transcript	0	0	0	0	0	0	0	0
14	269192	Transcript	0	1.35	1.47	0.00	0.51	0.07	0.00	0.09
15	ER1a	ExonRegion	0	20.96	87.19	1.58	1.95	15.87	9.28	10.43
16	E1a_E3a	KnownJunction	0	21.31	79.37	2.27	5.66	16.28	4.66	18.57
17	I1_SR2	SilentIntronRegion	0	20.42	6.14	2.43	0.73	1.44	0.38	1.01
18	I1_SR3	SilentIntronRegion	0	19.55	4.87	3.09	0.53	1.08	0.00	0.64
19	I1_SR4	SilentIntronRegion	0	17.40	5.54	1.59	0.62	1.83	0.53	0.86
20	I1_SR6	SilentIntronRegion	0	16.04	5.22	1.10	0.42	0.87	0.00	1.15
21	I1_AR6	ActiveIntronRegion	0	46.38	82.51	5.48	3.30	2.74	5.00	2.25
22	I1_SR7	SilentIntronRegion	0	13.75	13.56	1.08	0.58	1.54	1.03	1.82
23	I1_AR7	ActiveIntronRegion	0	14.20	6.99	0.81	0.00	2.81	0.00	1.59
24	ER2a	ExonRegion	0	3.23	5.08	0.28	3.60	1.37	0.00	0.57
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	4.82	0.00	0.00	0.00
26	ER3a	ExonRegion	0	40.11	164.53	4.39	7.42	44.83	13.78	19.48
27	E3a_E6b	KnownJunction	0	48.78	152.06	6.25	6.85	59.80	17.85	18.32
28	E3a_E7a	NovelJunction	0	0.82	16.79	0.00	1.08	0.99	0.00	0.66
29	ER4a	ExonRegion	0	3.37	1.21	0.00	0.00	0.37	0.00	0.00
30	ER4b	ExonRegion	0	16.55	14.77	1.19	2.23	6.10	3.38	2.45
31	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E4a_E6b	KnownJunction	0	0.68	0.00	1.70	3.31	0.00	4.26	3.12
33	ER5a	ExonRegion	0	0.11	4.28	0.00	0.00	1.45	0.00	0.61
34	E5a_E6b	KnownJunction	0	0.72	1.00	0.00	0.00	0.00	0.00	0.00
35	E6_Ac	NovelBoundary	0	24.15	1.52	2.01	0.00	0.00	0.00	1.49
36	ER6a	ExonRegion	0	2.77	7.33	0.23	0.25	2.13	0.65	2.27
37	ER6b	ExonRegion	0	52.25	187.09	6.77	7.48	61.55	19.62	22.94
38	ER6c	ExonRegion	0	87.38	229.06	9.78	11.30	117.91	23.55	30.68
39	E6a_E7a	KnownJunction	0	123.81	289.20	14.63	17.09	178.48	24.15	40.21
40	ER7a	ExonRegion	0	132.20	338.99	12.80	15.01	121.10	24.14	35.35
41	E7a_E8a	KnownJunction	0	113.14	392.21	11.98	11.05	90.39	34.54	30.76
42	ER8a	ExonRegion	0	146.11	327.21	12.81	16.80	149.63	30.36	34.16
43	E8a_E9a	KnownJunction	0	113.52	259.72	13.69	14.55	103.09	26.13	19.55
44	E8a_E10a	NovelJunction	1	5.24	37.38	0.00	1.68	0.00	8.42	0.00
45	ER9a	ExonRegion	0	160.59	274.35	21.01	12.90	133.92	25.60	31.64
46	E9a_E10a	KnownJunction	0	144.63	234.21	21.50	10.92	136.03	25.49	34.84
47	E10_Aa	NovelBoundary	0	15.05	4.36	1.78	0.00	0.00	0.00	0.83
48	ER10a	ExonRegion	0	97.95	256.16	17.03	13.48	116.44	20.81	33.15
49	E10a_E11a	KnownJunction	0	68.73	273.70	18.94	24.79	97.19	36.07	35.44
50	ER11a	ExonRegion	0	70.22	285.16	11.13	17.83	101.92	27.16	37.72
51	E11a_E12a	KnownJunction	0	70.70	271.12	10.16	14.20	120.57	19.64	34.17
52	ER12a	ExonRegion	0	107.04	319.10	13.73	22.92	146.10	30.30	48.07
53	E12a_E14a	KnownJunction	0	107.58	321.12	9.37	23.65	131.68	26.00	42.81
54	ER13a	ExonRegion	0	2.69	2.95	0.00	1.02	0.14	0.00	0.18
55	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER14a	ExonRegion	0	95.95	326.77	12.15	21.50	138.50	26.21	43.25
57	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E14a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E14a_E18a	KnownJunction	0	105.70	321.48	14.37	17.96	154.32	23.34	54.52
60	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	ER15a	ExonRegion	0	0.85	2.97	0.00	0.00	1.53	0.00	0.45
62	E16a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	ER16a	ExonRegion	0	0.00	2.02	0.23	0.00	0.54	0.00	0.00
64	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	0.00
65	ER17a	ExonRegion	0	0.00	0.13	0.00	0.00	0.00	1.23	0.00
66	ER18a	ExonRegion	0	71.50	254.11	8.51	14.37	105.40	19.65	36.17
67	E18a_E19a	KnownJunction	1	14.84	72.12	1.98	5.69	16.64	1.66	5.12
68	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	E18a_E22a	KnownJunction	1	35.55	110.52	3.39	8.18	81.03	15.57	19.30
70	ER19a	ExonRegion	0	16.44	54.57	1.78	4.89	11.90	3.56	4.59
71	I19_AR1	ActiveIntronRegion	1	14.22	29.09	0.57	1.57	2.94	0.00	4.18
72	I19_SR2	SilentIntronRegion	0	11.31	16.51	1.20	0.49	1.36	0.58	2.59
73	ER20a	ExonRegion	0	2.46	2.20	1.42	0.00	0.04	0.00	0.69
74	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	E20a_E22a	KnownJunction	0	0.98	1.52	2.26	0.00	0.00	0.00	0.00
76	ER21a	ExonRegion	0	1.86	6.90	0.55	0.00	0.54	0.00	0.01
77	E21a_E22a	KnownJunction	0	0.00	2.68	0.00	0.00	0.92	0.00	0.00
78	ER22a	ExonRegion	1	42.89	115.48	7.20	5.55	78.91	11.72	23.52
79	E22a_E23a	KnownJunction	1	44.25	103.93	8.79	4.61	42.67	7.80	28.63
80	ER23a	ExonRegion	0	37.97	120.39	5.72	7.04	43.99	11.47	20.11
81	E23a_E24a	KnownJunction	0	39.64	88.85	5.76	10.21	40.04	18.33	17.53
82	I23_SR2	SilentIntronRegion	0	8.03	16.79	1.26	0.71	2.08	0.16	0.39
83	I23_AR3	ActiveIntronRegion	0	8.94	16.40	1.67	0.70	2.88	1.54	0.75
84	I23_SR4	SilentIntronRegion	0	18.55	17.16	1.97	0.35	4.83	2.25	0.48
85	E24_Aa	NovelBoundary	1	17.11	10.06	2.95	1.27	6.82	0.00	0.00
86	ER24a	ExonRegion	0	70.99	140.38	8.68	7.71	64.87	13.26	22.33
87	E24a_E25a	KnownJunction	0	61.94	107.21	4.17	8.43	37.18	10.96	13.82
88	ER25a	ExonRegion	0	60.53	109.02	4.54	7.42	40.72	11.48	16.91
89	E25a_E26a	KnownJunction	1	19.89	41.32	0.50	2.74	21.72	9.57	7.22
90	E25a_E27a	KnownJunction	0	45.63	70.78	6.27	5.77	30.50	5.82	7.90
91	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
92	ER26a	ExonRegion	0	22.50	47.26	1.61	2.49	23.76	9.40	5.49
93	E26_Db	KnownBoundary	1	26.09	44.82	2.46	1.27	26.30	9.17	3.04
94	ER26b	ExonRegion	0	24.95	46.65	2.03	1.83	27.62	8.01	3.98
95	ER26c	ExonRegion	0	16.33	31.78	1.36	1.62	25.35	4.13	6.10
96	ER27a	ExonRegion	0	42.92	58.47	3.92	2.45	31.97	6.28	7.49
97	E27a_E28a	KnownJunction	1	61.60	72.96	7.93	2.90	34.12	8.98	6.03
98	ER28a	ExonRegion	0	62.19	78.51	6.36	3.51	44.93	3.31	8.59
99	E28a_E29a	KnownJunction	1	86.50	70.91	7.42	2.71	55.42	4.34	9.76
100	ER29a	ExonRegion	1	108.67	98.78	9.15	3.18	75.38	5.06	13.61
101	E29a_E30a	KnownJunction	0	110.95	112.28	13.48	4.09	75.66	5.98	15.75
102	ER30a	ExonRegion	0	103.01	95.08	6.20	6.16	92.68	6.71	15.92
103	E30_Da	NovelBoundary	0	17.86	19.65	0.00	2.00	3.53	0.00	0.87
104	E30a_E31a	KnownJunction	0	83.22	74.40	7.83	10.73	74.14	4.10	21.22
105	ER31a	ExonRegion	0	69.07	69.72	7.26	9.91	64.02	4.50	16.86
106	E31_Db	NovelBoundary	0	15.77	7.72	3.42	0.00	4.15	0.00	2.06
107	E31b_E32a	KnownJunction	0	34.60	40.56	1.57	1.44	20.98	1.23	4.70
108	ER31b	ExonRegion	0	52.58	58.71	4.26	5.23	36.23	3.16	13.99
109	I31_AR1	ActiveIntronRegion	0	13.64	9.47	1.07	0.19	1.63	1.28	0.59
110	ER32a	ExonRegion	0	45.13	48.79	4.39	4.12	36.28	4.88	7.16
111	E32_Da	KnownBoundary	0	2.50	1.42	0.00	0.00	4.15	4.90	0.00
112	E32_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	4.10	0.00
113	ER32b	ExonRegion	0	1.46	1.21	0.00	0.00	2.86	7.29	0.00
114	ER32c	ExonRegion	1	1.05	1.04	0.00	0.00	1.48	16.51	0.11
115	IG21_AR7	ActiveIntergenicRegion	0	0.82	10.45	0.00	0.17	0.00	0.65	0.01
116	IG21_SR8	SilentIntergenicRegion	0	1.77	18.44	0.00	1.06	0.00	2.15	0.37
117	IG21_AR8	ActiveIntergenicRegion	0	13.92	40.95	0.60	1.59	0.14	4.82	7.01
118	IG21_AR10	ActiveIntergenicRegion	0	1.51	12.43	0.00	0.00	0.00	0.72	0.93