Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NAPG	Gene	0	242.24	162.24	148.79	75.08	117.49	52.27	169.33
2	322897	Transcript	0	182.47	135.55	123.75	60.31	88.58	44.70	139.48
3	ER1a	ExonRegion	0	99.05	102.26	75.19	42.19	37.70	31.49	77.41
4	E1a_E2a	KnownJunction	0	75.69	127.78	41.95	36.57	21.07	44.27	77.99
5	ER2a	ExonRegion	0	84.30	145.01	79.99	53.55	29.79	39.72	108.86
6	E2a_E3a	KnownJunction	0	159.79	151.59	143.88	51.07	39.79	61.51	155.45
7	ER3a	ExonRegion	0	124.13	100.49	103.93	35.47	81.98	43.26	95.97
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER4a	ExonRegion	0	3.07	1.52	0.88	0.19	1.54	0.25	0.44
11	E5a_E6a	KnownJunction	0	53.64	144.70	77.25	41.31	89.31	60.17	132.42
12	ER5a	ExonRegion	0	17.04	37.49	20.95	16.34	30.24	11.79	36.50
13	E6_Aa	NovelBoundary	1	105.88	29.82	46.62	8.32	10.14	5.55	17.77
14	ER6a	ExonRegion	0	158.40	164.75	123.19	72.02	70.03	54.69	155.39
15	E6a_E7a	KnownJunction	0	186.91	159.60	129.32	71.11	78.96	51.32	142.34
16	ER7a	ExonRegion	0	181.40	194.25	159.41	80.35	76.38	57.70	167.63
17	E7a_E8a	KnownJunction	0	181.07	189.84	178.32	95.25	77.55	64.56	178.71
18	ER8a	ExonRegion	0	186.33	149.10	169.11	70.92	98.07	56.76	169.85
19	E8_Da	NovelBoundary	1	62.34	46.82	34.23	4.12	12.59	1.29	18.17
20	E8a_E9a	KnownJunction	0	156.77	105.16	129.33	64.69	80.92	38.40	149.20
21	I8	Intron	0	90.93	22.13	37.96	6.74	14.51	4.18	19.58
22	I8_AR1	ActiveIntronRegion	0	92.90	21.56	46.23	10.70	12.86	4.32	18.17
23	I8_SR1	SilentIntronRegion	0	126.17	37.39	59.80	14.20	21.26	4.90	21.42
24	I8_AR2	ActiveIntronRegion	0	98.30	21.03	50.58	3.62	10.21	1.32	15.45
25	I8_AR3	ActiveIntronRegion	0	54.80	10.02	37.59	1.25	9.06	1.23	11.13
26	I8_AR4	ActiveIntronRegion	0	47.78	10.39	31.38	2.30	5.62	0.90	13.70
27	I8_SR2	SilentIntronRegion	0	90.43	20.15	35.96	5.64	14.95	4.11	19.57
28	I8_AR5	ActiveIntronRegion	0	94.59	38.63	39.74	15.38	16.08	7.16	24.27
29	E9_Aa	NovelBoundary	0	89.11	20.18	38.81	4.90	20.17	3.30	27.12
30	ER9a	ExonRegion	0	229.21	113.81	183.00	64.31	131.12	42.29	188.30
31	E9a_E10a	KnownJunction	0	335.08	162.62	251.47	85.20	159.46	58.56	234.62
32	ER10a	ExonRegion	0	301.83	175.67	206.03	83.90	153.33	59.77	210.73
33	E10a_E11a	KnownJunction	0	292.41	167.90	138.99	75.75	159.25	37.63	157.23
34	ER11a	ExonRegion	0	474.16	232.13	222.61	117.75	221.83	74.69	271.74
35	E11a_E12a	KnownJunction	0	542.21	286.33	235.39	130.58	229.10	77.75	285.81
36	ER12a	ExonRegion	0	354.22	205.62	176.12	98.65	170.00	61.53	211.44
37	IG6_AR1	ActiveIntergenicRegion	0	187.76	87.82	119.48	44.53	97.46	32.41	123.75
38	IG6_AR19	ActiveIntergenicRegion	0	0.35	0.00	0.28	0.42	12.87	2.34	0.00