Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RNMT	Gene	0	113.66	101.58	164.13	126.18	205.62	107.51	169.42
2	383314	Transcript	0	49.91	31.81	61.02	48.05	35.57	39.35	46.26
3	406931	Transcript	1	24.28	28.64	46.59	45.70	50.21	19.56	23.55
4	262173	Transcript	0	28.18	36.85	44.48	50.71	25.65	31.88	39.13
5	ER1a	ExonRegion	0	2.20	0.06	2.68	0.83	4.90	2.51	0.58
6	ER1b	ExonRegion	0	51.61	24.15	70.19	53.00	58.36	29.42	40.36
7	E1a_E2a	KnownJunction	1	116.35	23.22	134.66	68.16	102.72	48.75	71.11
8	E1a_E3b	KnownJunction	1	24.28	28.64	46.59	45.70	50.21	19.56	23.55
9	ER2a	ExonRegion	0	87.77	53.59	91.28	66.77	53.43	55.71	90.03
10	E2a_E3b	KnownJunction	0	42.98	80.15	74.47	103.68	13.83	88.55	68.22
11	ER3a	ExonRegion	0	28.18	36.85	44.48	50.71	25.65	31.88	39.13
12	ER3b	ExonRegion	0	117.85	120.95	166.48	141.61	105.57	109.66	130.73
13	E3a_E4a	KnownJunction	0	155.55	106.53	211.56	153.55	160.89	137.35	138.71
14	ER4a	ExonRegion	1	206.75	130.52	265.93	208.09	172.69	149.45	138.71
15	E4a_E5a	KnownJunction	1	225.40	117.72	277.59	196.87	170.11	166.72	126.22
16	ER5a	ExonRegion	0	240.20	155.78	284.55	192.87	244.86	140.61	161.03
17	E5a_E6a	KnownJunction	1	214.12	184.37	284.06	206.71	211.07	151.26	150.98
18	ER6a	ExonRegion	0	215.00	171.97	280.93	210.20	217.44	130.24	183.47
19	E6a_E7a	KnownJunction	0	204.97	150.88	287.45	213.99	287.35	113.28	190.26
20	ER7a	ExonRegion	0	141.49	103.94	195.61	152.59	173.27	90.18	149.20
21	E7a_E8a	KnownJunction	0	128.60	73.95	191.59	137.95	137.44	103.85	133.61
22	ER8a	ExonRegion	0	132.73	87.84	205.71	148.57	136.22	118.57	142.96
23	E8a_E9a	KnownJunction	0	104.60	67.91	184.47	133.69	117.29	105.00	134.70
24	E8a_E10a	NovelJunction	1	2.92	16.97	0.00	3.03	0.00	11.79	0.00
25	I8_SR2	SilentIntronRegion	1	14.20	20.69	6.63	13.48	2.66	5.86	3.14
26	ER9a	ExonRegion	0	128.71	87.60	221.70	147.17	177.10	111.03	169.01
27	E9a_E10a	KnownJunction	0	118.60	101.09	207.19	160.11	213.95	83.64	180.45
28	ER10a	ExonRegion	0	93.76	110.18	170.28	161.09	139.10	128.35	174.76
29	E10a_E11a	KnownJunction	0	93.10	109.37	151.78	135.40	118.03	117.78	131.13
30	ER11a	ExonRegion	0	80.17	92.54	160.66	160.27	121.53	102.80	175.91
31	E11a_E12a	KnownJunction	0	53.89	67.91	131.30	125.54	120.15	71.93	144.02
32	I11	Intron	1	31.99	12.88	28.20	12.86	7.14	9.46	4.54
33	I11_SR1	SilentIntronRegion	0	30.67	12.23	27.93	12.40	7.03	8.42	4.54
34	I11_AR1	ActiveIntronRegion	1	44.60	19.08	30.92	17.23	8.23	19.27	4.58
35	E12_Aa	NovelBoundary	1	27.05	9.41	49.88	24.19	8.28	18.41	6.66
36	ER12a	ExonRegion	0	88.54	70.65	153.68	112.52	131.04	82.92	134.45
37	E12_Da	KnownBoundary	0	87.09	32.18	126.19	60.01	128.06	28.89	95.02
38	ER12b	ExonRegion	0	106.42	101.20	154.42	118.52	236.48	109.16	183.81
39	ER12c	ExonRegion	0	0.26	2.02	2.03	0.83	2.97	1.23	1.35