Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CEP192	Gene	0	75.63	23.57	44.75	13.39	76.07	11.99	33.51
2	325971	Transcript	0	40.96	14.90	28.61	10.57	34.32	6.19	17.62
3	399863	Transcript	0	0.00	0.00	0.00	0.00	0.04	0.00	0.03
4	IG27_SR3	SilentIntergenicRegion	0	20.93	4.97	9.88	1.99	2.16	0.95	2.85
5	IG27_AR4	ActiveIntergenicRegion	0	20.32	5.53	12.38	2.74	7.01	1.83	4.80
6	IG27_AR5	ActiveIntergenicRegion	0	14.46	6.57	13.62	6.02	23.68	5.16	8.28
7	ER1a	ExonRegion	0	23.15	7.64	20.32	4.82	22.81	5.41	13.70
8	E1a_E2a	KnownJunction	0	23.60	5.78	16.64	6.04	18.35	2.63	21.74
9	ER2a	ExonRegion	0	37.73	14.67	21.92	7.46	22.94	3.52	17.49
10	E2a_E3a	KnownJunction	1	45.51	26.51	26.83	5.63	24.99	8.66	11.41
11	ER3a	ExonRegion	0	57.99	22.62	33.37	14.18	41.46	6.28	23.03
12	E3a_E4a	KnownJunction	0	54.71	22.54	32.06	8.83	42.37	10.53	20.06
13	ER4a	ExonRegion	0	62.40	18.65	42.09	11.17	36.58	11.00	22.49
14	E4a_E5a	KnownJunction	0	52.61	12.98	37.64	9.89	42.51	7.02	16.27
15	E5_Aa	NovelBoundary	1	22.88	0.00	20.36	4.33	1.18	1.26	0.77
16	ER5a	ExonRegion	0	42.56	19.37	41.33	13.17	38.81	6.48	16.02
17	E5a_E6a	KnownJunction	0	35.13	10.22	31.03	14.14	27.55	8.90	11.88
18	ER6a	ExonRegion	0	48.04	14.19	33.70	15.61	39.64	6.30	17.45
19	E6a_E8a	KnownJunction	1	33.43	14.71	29.75	20.89	48.55	5.68	24.56
20	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.04	0.00	0.03
21	ER8a	ExonRegion	0	51.25	16.82	33.88	12.57	45.73	3.52	26.00
22	E8a_E9a	KnownJunction	0	45.33	16.26	25.94	15.69	54.01	6.81	23.42
23	ER9a	ExonRegion	0	37.34	15.45	29.88	9.08	40.76	6.32	16.37
24	E9a_E10a	KnownJunction	0	4.54	0.00	1.35	0.00	2.05	0.00	0.00
25	E9a_E12a	NovelJunction	1	6.74	4.07	14.10	6.15	0.00	0.00	3.07
26	I9_AR2	ActiveIntronRegion	0	2.26	1.21	4.52	0.00	15.37	0.00	2.51
27	I9_AR3	ActiveIntronRegion	0	22.11	9.57	19.49	5.36	37.28	2.22	8.78
28	ER10a	ExonRegion	0	57.36	11.93	30.04	4.70	61.87	7.95	20.76
29	E10a_E11a	KnownJunction	0	63.17	8.20	31.15	7.15	55.76	9.70	28.08
30	ER11a	ExonRegion	0	51.13	14.45	32.47	12.78	60.39	9.16	32.92
31	E11a_E12a	KnownJunction	0	52.47	13.82	43.01	15.50	92.17	8.79	31.93
32	ER12a	ExonRegion	0	132.43	24.75	73.85	15.19	91.25	12.85	33.62
33	E12a_E13a	KnownJunction	0	99.17	22.30	53.86	13.65	96.41	5.47	33.21
34	ER13a	ExonRegion	0	89.85	20.19	42.01	11.09	72.04	8.97	35.07
35	E13a_E14a	KnownJunction	1	47.33	26.67	30.54	5.01	53.71	5.49	22.96
36	ER14a	ExonRegion	0	37.80	16.27	25.47	10.32	50.02	8.48	29.32
37	E14a_E15a	KnownJunction	0	34.38	18.15	32.09	10.05	47.79	4.07	28.33
38	ER15a	ExonRegion	0	50.94	25.81	34.62	15.53	62.60	10.54	31.73
39	E15a_E16a	KnownJunction	0	62.99	12.74	29.07	7.91	67.57	12.27	24.21
40	E15a_E17a	NovelJunction	1	21.38	2.34	23.27	4.20	4.38	2.76	7.41
41	ER16a	ExonRegion	0	67.40	18.08	28.38	10.92	83.96	7.07	30.03
42	E16a_E17a	KnownJunction	0	83.48	19.44	26.60	20.24	99.98	15.36	30.54
43	ER17a	ExonRegion	0	79.33	27.27	44.94	11.15	89.20	10.98	43.07
44	E17a_E18a	KnownJunction	0	58.43	17.84	37.88	11.13	49.01	5.52	36.73
45	ER18a	ExonRegion	0	79.09	30.24	44.50	9.93	70.42	16.50	43.90
46	E18a_E19a	KnownJunction	0	90.91	27.03	36.10	8.18	88.71	16.00	32.10
47	ER19a	ExonRegion	0	68.83	23.89	32.50	11.25	69.30	15.99	33.66
48	E19a_E20a	KnownJunction	0	82.50	33.26	37.06	10.46	83.38	11.98	32.33
49	ER20a	ExonRegion	0	102.73	22.00	44.00	13.83	83.41	13.33	40.47
50	E20a_E21a	KnownJunction	0	100.92	14.11	52.81	19.72	63.83	15.46	46.59
51	ER21a	ExonRegion	0	75.09	26.41	47.34	24.98	85.01	13.69	38.16
52	E21a_E22a	KnownJunction	0	74.77	25.46	52.81	26.98	84.88	11.98	40.33
53	ER22a	ExonRegion	0	88.41	30.03	52.91	19.11	78.35	9.29	41.56
54	E22a_E23a	KnownJunction	0	72.63	26.69	55.38	13.46	75.64	12.14	36.82
55	ER23a	ExonRegion	0	62.70	24.34	52.90	15.38	85.05	6.96	40.93
56	E23a_E24a	KnownJunction	0	73.59	21.25	37.84	10.35	92.56	9.70	34.35
57	E23a_E25a	NovelJunction	0	14.50	7.70	9.50	3.93	2.86	4.58	2.88
58	ER24a	ExonRegion	0	86.52	28.32	50.42	12.35	90.37	12.10	39.44
59	E24a_E25a	KnownJunction	0	125.54	24.01	53.49	8.15	89.84	17.66	39.80
60	ER25a	ExonRegion	0	124.98	31.76	63.40	16.22	115.17	12.89	58.60
61	E25a_E26a	KnownJunction	0	130.57	31.08	69.45	18.67	112.11	11.98	60.58
62	ER26a	ExonRegion	0	131.66	31.33	69.47	16.61	116.88	13.62	53.34
63	E26a_E27a	KnownJunction	0	98.74	23.72	51.55	22.11	78.45	13.05	46.30
64	ER27a	ExonRegion	0	90.05	20.58	52.93	13.08	82.95	14.08	42.24
65	E27a_E28a	KnownJunction	0	89.89	25.46	50.67	9.27	93.71	9.73	37.33
66	ER28a	ExonRegion	0	115.65	28.07	72.49	16.33	96.18	15.27	45.92
67	E28a_E29a	KnownJunction	0	68.36	25.30	67.11	11.89	63.00	14.98	33.64
68	E29_Aa	NovelBoundary	1	27.37	0.00	27.73	0.00	0.00	0.00	0.77
69	ER29a	ExonRegion	0	107.62	29.76	74.25	16.37	94.87	15.47	40.30
70	E29a_E30a	KnownJunction	0	105.51	29.69	76.92	11.24	131.22	11.85	42.45
71	ER30a	ExonRegion	0	75.97	23.28	58.89	11.59	86.23	14.97	33.26
72	E30a_E31a	KnownJunction	0	61.47	18.52	39.89	12.57	61.85	6.14	29.37
73	ER31a	ExonRegion	0	42.71	22.56	28.78	8.89	63.85	14.49	26.37
74	E31_Da	NovelBoundary	1	19.86	0.00	16.48	0.00	2.12	0.00	0.00
75	E31a_E32a	KnownJunction	0	54.11	21.02	36.60	11.59	54.40	14.55	22.97
76	ER32a	ExonRegion	0	50.67	24.27	35.97	13.53	74.98	11.64	38.77
77	E32a_E33a	KnownJunction	0	60.07	19.94	32.89	15.74	86.47	20.74	39.58
78	ER33a	ExonRegion	0	66.32	23.19	47.92	14.54	76.55	15.94	45.73
79	E33a_E34a	KnownJunction	0	63.69	21.41	34.23	5.04	70.59	6.86	37.81
80	ER34a	ExonRegion	0	104.21	31.51	59.23	14.38	114.67	18.40	51.26
81	E34a_E35a	KnownJunction	0	119.42	43.79	53.04	20.16	136.47	17.71	57.15
82	ER35a	ExonRegion	0	119.16	31.68	56.30	17.57	130.61	15.59	46.25
83	E35a_E36a	KnownJunction	1	89.66	25.80	49.18	11.84	117.98	5.20	36.89
84	ER36a	ExonRegion	0	103.72	32.33	54.09	16.29	162.64	11.86	57.69
85	E36a_E37a	KnownJunction	0	130.72	32.05	54.31	14.60	135.25	13.19	51.41
86	ER37a	ExonRegion	0	108.88	35.06	44.60	16.03	161.77	17.49	47.79
87	E37a_E38a	KnownJunction	0	116.30	36.04	45.12	22.97	162.71	32.00	50.89
88	ER38a	ExonRegion	0	108.37	26.44	38.23	16.93	166.26	24.62	41.00
89	E38a_E39a	KnownJunction	0	49.22	9.09	26.64	13.65	67.08	17.71	27.29
90	ER39a	ExonRegion	0	82.91	17.15	34.23	12.07	101.23	19.01	26.37
91	E39a_E40a	KnownJunction	0	71.35	22.72	41.06	23.60	78.89	21.31	34.48
92	ER40a	ExonRegion	0	58.92	28.15	39.01	14.92	85.80	22.75	31.56
93	E40a_E41a	KnownJunction	0	34.05	26.25	33.68	9.13	94.06	22.27	16.60
94	ER41a	ExonRegion	0	37.27	25.95	28.13	10.13	41.16	16.96	19.18