Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMCHD1	Gene	0	177.69	121.09	179.64	124.77	158.93	138.80	92.60
2	261598	Transcript	0	171.49	114.57	176.43	120.50	149.15	129.09	88.80
3	IG20	Intergenic	0	9.18	6.12	10.14	6.15	7.18	4.50	4.16
4	IG20_AR1	ActiveIntergenicRegion	0	3.20	0.00	6.56	0.00	18.08	0.94	0.00
5	IG20_AR7	ActiveIntergenicRegion	0	72.00	66.53	92.07	72.09	60.77	50.37	44.66
6	IG20_AR8	ActiveIntergenicRegion	0	15.09	14.26	19.71	14.10	21.57	8.94	7.23
7	IG20_AR9	ActiveIntergenicRegion	0	33.49	35.18	35.22	35.78	40.03	19.90	19.64
8	IG20_SR5	SilentIntergenicRegion	0	104.21	103.34	130.56	107.50	99.10	66.98	60.16
9	IG20_AR10	ActiveIntergenicRegion	0	38.21	42.09	48.17	46.24	51.20	21.04	26.62
10	IG20_AR11	ActiveIntergenicRegion	0	56.63	28.27	47.97	29.08	66.88	25.12	21.05
11	IG20_AR12	ActiveIntergenicRegion	0	82.89	44.28	90.48	53.37	77.61	55.55	35.52
12	ER1a	ExonRegion	0	83.90	42.78	86.68	49.34	90.60	52.76	32.29
13	E1a_E2a	KnownJunction	0	173.39	99.23	182.79	117.36	120.61	109.18	72.59
14	E2_Aa	NovelBoundary	1	71.00	1.63	68.72	0.00	1.18	0.00	1.69
15	ER2a	ExonRegion	0	187.13	108.67	178.94	104.78	119.95	118.78	74.21
16	E2a_E3a	KnownJunction	0	131.50	99.25	139.15	88.59	69.41	97.15	63.40
17	ER3a	ExonRegion	0	128.09	114.40	136.58	90.82	81.36	105.25	64.56
18	E3a_E4a	KnownJunction	0	100.11	113.05	118.02	100.75	73.61	98.01	72.37
19	ER4a	ExonRegion	0	98.76	98.34	120.67	87.64	84.59	96.28	58.28
20	E4a_E5a	KnownJunction	0	89.07	84.33	108.68	82.55	78.03	81.28	54.99
21	ER5a	ExonRegion	0	96.86	89.68	122.38	106.25	70.51	105.60	71.91
22	E5a_E6a	KnownJunction	0	99.64	84.09	114.68	110.59	44.01	103.18	55.65
23	ER6a	ExonRegion	0	149.51	81.92	149.45	98.76	89.09	88.26	56.48
24	E6a_E7a	KnownJunction	0	203.12	84.96	202.66	111.02	115.98	98.03	79.14
25	ER7a	ExonRegion	0	224.04	95.63	221.21	113.22	139.46	109.57	70.73
26	E7a_E8a	KnownJunction	1	255.44	94.58	220.04	107.25	119.39	113.39	53.48
27	ER8a	ExonRegion	0	231.09	87.67	230.36	99.64	132.15	99.99	69.42
28	E8a_E9a	KnownJunction	0	149.31	57.88	152.57	48.55	103.55	47.73	53.20
29	E8a_E10a	NovelJunction	1	34.68	19.73	17.37	10.78	3.09	19.16	4.11
30	E9_Aa	NovelBoundary	0	70.45	26.59	68.98	21.29	42.37	16.70	25.81
31	ER9a	ExonRegion	0	102.42	62.78	137.82	60.65	92.92	46.46	59.96
32	E9a_E10a	KnownJunction	0	61.17	90.01	110.57	60.33	69.92	44.22	51.65
33	ER10a	ExonRegion	0	101.94	86.33	143.02	72.41	89.87	70.70	69.25
34	E10a_E11a	KnownJunction	0	101.98	78.24	135.47	57.32	81.03	58.77	74.85
35	ER11a	ExonRegion	0	79.26	79.51	129.67	74.58	69.80	68.19	72.68
36	E11a_E12a	KnownJunction	0	61.02	68.04	107.45	77.97	63.65	56.28	61.85
37	I11	Intron	1	37.88	13.38	30.71	8.33	10.82	8.24	3.53
38	I11_SR1	SilentIntronRegion	0	47.40	19.85	34.76	9.23	13.48	12.09	4.85
39	I11_AR4	ActiveIntronRegion	1	46.43	13.41	34.24	8.30	14.56	10.05	3.68
40	ER12a	ExonRegion	0	118.38	98.50	162.01	101.81	87.38	97.59	84.83
41	E12a_E13a	KnownJunction	0	84.02	87.93	138.07	82.17	99.59	77.37	70.11
42	ER13a	ExonRegion	0	112.09	105.22	160.31	100.51	101.70	110.05	89.20
43	E13a_E14a	KnownJunction	0	90.98	99.94	147.30	101.62	96.87	87.55	86.17
44	ER14a	ExonRegion	0	135.27	107.97	180.55	91.29	121.79	106.69	94.55
45	E14a_E15a	KnownJunction	0	159.49	91.42	201.00	112.89	151.30	106.88	104.52
46	ER15a	ExonRegion	0	171.59	122.67	199.85	125.54	152.64	127.28	106.09
47	E15a_E16a	KnownJunction	0	159.97	142.94	196.21	152.50	153.02	131.37	117.92
48	ER16a	ExonRegion	0	192.03	147.67	208.01	142.21	157.26	138.15	107.89
49	E16a_E17a	KnownJunction	0	193.25	131.02	192.13	105.68	152.26	111.35	87.69
50	ER17a	ExonRegion	0	195.39	132.54	214.09	114.57	160.76	115.92	107.51
51	E17a_E18a	KnownJunction	0	179.10	130.31	193.78	131.77	134.81	102.46	84.86
52	ER18a	ExonRegion	0	175.46	135.80	207.44	131.41	122.20	129.73	90.14
53	E18a_E19a	KnownJunction	0	138.51	86.70	178.87	123.13	110.15	114.11	81.65
54	ER19a	ExonRegion	0	193.43	116.73	217.76	120.46	193.25	130.58	101.68
55	E19a_E20a	KnownJunction	0	262.70	132.54	268.88	128.17	219.46	140.83	108.42
56	E19a_E21a	NovelJunction	0	6.39	26.64	10.40	18.45	0.95	24.12	2.92
57	ER20a	ExonRegion	0	229.77	131.40	249.97	139.39	153.98	139.96	106.91
58	E20a_E21a	KnownJunction	0	203.72	115.94	221.62	121.75	127.00	140.65	102.51
59	ER21a	ExonRegion	0	273.15	132.45	262.09	136.87	215.11	154.01	102.10
60	E21a_E22a	KnownJunction	0	198.28	131.54	178.01	120.64	138.13	127.46	90.17
61	ER22a	ExonRegion	0	248.77	127.98	220.83	117.33	176.51	154.21	104.42
62	E22a_E23a	KnownJunction	0	201.90	99.94	186.50	109.56	147.31	123.39	90.62
63	ER23a	ExonRegion	0	192.11	115.49	189.76	116.26	186.73	121.96	92.04
64	E23a_E24a	KnownJunction	0	172.14	112.55	177.09	135.40	200.91	125.26	86.28
65	E23a_E25a	NovelJunction	0	14.62	11.80	10.07	7.29	2.19	15.30	0.00
66	ER24a	ExonRegion	0	201.54	114.85	187.48	130.78	178.44	144.54	110.12
67	E24a_E25a	KnownJunction	0	196.94	139.82	223.24	131.55	213.68	188.70	112.97
68	ER25a	ExonRegion	0	159.15	139.82	165.88	153.18	193.25	161.55	101.07
69	E25a_E26a	KnownJunction	0	165.66	135.74	137.98	154.45	192.08	161.76	94.86
70	ER26a	ExonRegion	0	216.26	146.43	192.52	157.70	187.57	177.84	111.00
71	E26a_E27a	KnownJunction	0	264.42	162.33	214.92	191.67	145.14	209.17	135.45
72	ER27a	ExonRegion	0	277.56	151.00	242.94	163.39	192.28	217.74	125.48
73	E27a_E28a	KnownJunction	0	230.12	138.56	242.38	149.76	225.30	249.16	126.99
74	ER28a	ExonRegion	0	219.43	125.05	215.54	149.42	174.00	185.41	102.02
75	E28a_E29a	KnownJunction	0	275.95	143.94	233.75	156.94	183.29	186.96	100.19
76	ER29a	ExonRegion	0	281.85	154.60	263.15	163.42	254.25	205.91	128.04
77	E29a_E30a	KnownJunction	0	265.74	166.46	251.68	192.83	274.14	182.35	127.33
78	ER30a	ExonRegion	0	292.51	170.42	266.69	173.85	245.38	215.61	132.87
79	E30a_E31a	KnownJunction	0	235.93	151.82	216.81	181.00	232.90	219.65	129.38
80	E30a_E32a	NovelJunction	0	13.45	9.09	16.05	4.90	1.96	4.21	0.64
81	ER31a	ExonRegion	0	225.64	148.93	211.18	148.59	257.70	189.91	116.79
82	E31a_E32a	KnownJunction	0	236.65	140.60	235.17	167.48	200.28	181.33	117.33
83	ER32a	ExonRegion	0	225.96	157.89	200.86	177.27	201.59	192.48	104.23
84	E32a_E33a	KnownJunction	0	178.17	170.53	192.61	174.79	211.72	187.30	103.34
85	E32a_E34a	NovelJunction	0	14.39	31.55	4.89	28.09	1.18	31.03	0.00
86	ER33a	ExonRegion	0	138.62	139.79	165.38	139.61	203.68	145.27	98.26
87	E33a_E34a	KnownJunction	0	96.43	84.36	118.35	131.26	179.26	102.80	86.07
88	ER34a	ExonRegion	0	107.13	90.09	109.77	113.44	133.80	114.69	75.36
89	E34a_E35a	KnownJunction	0	0.00	0.00	0.79	1.68	0.00	1.55	0.00
90	E34a_E36a	NovelJunction	0	203.28	156.26	154.35	130.44	255.66	170.58	102.71
91	ER35a	ExonRegion	0	3.68	0.91	0.98	3.30	3.35	2.85	1.81
92	E35a_E36a	KnownJunction	0	1.82	2.26	0.00	1.33	0.00	3.11	0.00
93	ER36a	ExonRegion	0	264.94	215.21	199.11	222.04	266.23	240.21	131.93
94	E36a_E37a	KnownJunction	0	352.37	237.65	265.69	258.04	379.54	295.41	161.60
95	ER37a	ExonRegion	0	254.29	185.15	189.40	196.33	269.00	232.99	146.29
96	E37a_E38a	KnownJunction	0	140.10	98.89	143.50	114.51	213.49	114.97	88.90
97	ER38a	ExonRegion	0	162.39	141.27	143.79	154.38	215.29	186.51	98.94
98	IG21_AR1	ActiveIntergenicRegion	0	92.38	60.02	77.18	58.21	109.65	95.64	51.49
99	IG21_AR2	ActiveIntergenicRegion	0	38.10	26.22	37.52	29.10	76.85	54.94	28.72