Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EPB41L3	Gene	0	1.07	7.22	6.72	6.70	61.37	116.50	0.02
2	400111	Transcript	0	0.11	1.73	1.56	3.92	1.24	12.57	0.00
3	342933	Transcript	0	0.12	0.00	0.00	0.32	3.33	1.06	0.00
4	341928	Transcript	0	0.22	0.80	0.95	0.93	9.05	17.06	0.00
5	IG33_AR24	ActiveIntergenicRegion	0	0.36	0.94	0.69	14.31	1.91	28.43	0.00
6	IG33_SR14	SilentIntergenicRegion	0	0.69	1.52	1.81	17.80	2.71	33.40	0.00
7	IG33_AR23	ActiveIntergenicRegion	0	2.84	1.26	12.45	16.03	14.16	52.71	0.00
8	IG33_SR13	SilentIntergenicRegion	0	1.08	0.00	2.50	4.46	1.08	10.59	0.00
9	ER1a	ExonRegion	0	0.22	3.47	1.34	1.28	1.31	8.45	0.00
10	E1a_E3b	KnownJunction	0	0.00	0.00	1.78	6.56	1.18	16.70	0.00
11	ER2a	ExonRegion	0	0.12	0.00	0.00	0.32	3.33	1.06	0.00
12	E2_Ab	KnownBoundary	0	0.63	0.00	0.00	0.00	2.74	4.21	0.00
13	ER2b	ExonRegion	0	0.06	0.00	0.00	0.59	3.16	14.73	0.00
14	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.68	4.29	10.51	0.00
15	ER3a	ExonRegion	0	0.00	0.96	0.04	1.80	4.29	15.61	0.00
16	E3_Ab	KnownBoundary	0	0.00	1.34	1.01	3.74	5.76	16.78	0.00
17	ER3b	ExonRegion	0	0.24	3.77	1.85	7.69	9.60	59.61	0.00
18	E3a_E4a	KnownJunction	0	0.00	7.83	5.19	14.47	18.00	115.29	0.00
19	ER4a	ExonRegion	0	0.63	6.90	8.57	14.13	54.54	173.39	0.00
20	E4a_E5a	KnownJunction	0	0.68	9.75	8.92	14.14	87.39	220.45	0.00
21	ER5a	ExonRegion	0	0.74	11.07	9.72	13.03	78.05	212.59	0.00
22	E5a_E6a	KnownJunction	0	1.03	7.67	7.49	5.42	83.68	157.93	0.00
23	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	3.93	1.18	24.98	0.00
24	E5a_E10a	NovelJunction	0	0.00	0.00	1.49	0.00	3.41	11.98	0.00
25	ER6a	ExonRegion	0	0.73	9.07	10.95	6.52	90.31	174.26	0.00
26	E6a_E7a	KnownJunction	0	0.00	9.98	9.60	4.96	98.48	168.03	0.00
27	ER7a	ExonRegion	0	0.00	10.36	10.29	14.45	98.84	153.19	0.00
28	E7a_E8a	KnownJunction	0	0.00	7.15	10.59	5.28	74.90	96.59	0.00
29	ER8a	ExonRegion	0	0.27	6.10	8.80	7.65	83.87	115.16	0.00
30	E8a_E9a	KnownJunction	0	0.00	2.84	11.93	5.99	99.17	140.83	0.00
31	E8a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	9.25	0.00
32	ER9a	ExonRegion	0	1.19	2.53	13.11	5.48	89.41	175.30	0.00
33	E9a_E10a	KnownJunction	0	1.30	0.00	15.30	5.17	85.00	201.72	0.00
34	ER10a	ExonRegion	0	1.52	0.37	12.94	10.36	90.77	144.37	0.00
35	E10a_E11a	KnownJunction	0	1.60	1.63	7.82	10.48	69.92	132.87	0.00
36	ER11a	ExonRegion	0	1.54	3.48	9.57	11.96	83.15	136.26	0.00
37	E11a_E12a	KnownJunction	0	1.87	8.35	10.46	10.62	92.95	145.01	0.00
38	ER12a	ExonRegion	0	1.03	5.97	10.06	10.45	91.85	155.97	0.00
39	E12a_E13a	KnownJunction	0	1.03	6.09	8.32	11.05	111.35	160.72	0.00
40	E12a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	6.13	8.47	0.00
41	ER13a	ExonRegion	0	1.58	5.63	9.09	14.12	105.16	158.96	0.00
42	E13_Ab	KnownBoundary	0	1.69	4.41	11.93	15.66	107.52	149.25	0.00
43	ER13b	ExonRegion	0	0.73	6.18	8.41	6.86	93.31	139.75	0.00
44	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E13a_E15a	KnownJunction	0	0.00	4.15	5.45	14.20	82.87	105.03	0.00
46	E13a_E17a	NovelJunction	0	0.00	1.37	1.24	3.01	3.14	41.35	0.00
47	ER14a	ExonRegion	0	0.00	0.33	0.00	0.17	0.37	1.00	0.00
48	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER15a	ExonRegion	0	0.00	10.93	3.12	10.23	58.07	104.60	0.00
50	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	E15a_E17a	KnownJunction	0	0.00	19.23	2.69	5.55	54.50	102.08	0.00
52	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.07	0.10	0.00
53	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER17a	ExonRegion	0	1.16	16.42	6.14	8.75	65.88	136.76	0.29
55	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	6.32	0.00
56	E17a_E19a	KnownJunction	0	0.77	17.39	3.75	4.12	32.92	110.50	0.00
57	ER18a	ExonRegion	0	0.00	0.00	0.00	0.97	1.88	15.47	0.00
58	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	1.52	2.14	11.42	0.00
59	ER19a	ExonRegion	0	1.36	15.69	5.33	7.29	83.57	175.46	0.13
60	E19a_E20a	KnownJunction	0	2.62	24.88	9.83	8.34	113.44	273.89	0.00
61	ER20a	ExonRegion	0	3.02	20.80	11.38	13.30	113.20	277.11	0.00
62	E20a_E21a	KnownJunction	0	0.00	18.84	2.04	11.19	104.68	187.25	0.00
63	E20a_E22a	NovelJunction	0	0.00	1.13	0.00	0.00	0.00	14.90	0.00
64	ER21a	ExonRegion	0	1.89	20.06	5.68	12.82	149.06	238.05	0.00
65	E21a_E22a	KnownJunction	0	3.25	10.40	6.65	13.95	91.59	181.65	0.00
66	E21a_E23a	NovelJunction	0	0.00	2.84	0.78	0.00	3.20	24.52	0.00
67	E21a_E24a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	11.42	0.00
68	ER22a	ExonRegion	0	0.98	10.92	9.13	6.45	75.15	139.87	0.00
69	E22a_E23a	KnownJunction	0	0.00	7.49	4.76	3.01	14.96	94.66	0.00
70	E22a_E24a	NovelJunction	0	1.03	4.65	0.00	1.68	75.04	41.19	0.00
71	ER23a	ExonRegion	0	1.08	8.77	4.31	6.15	25.54	120.52	0.00
72	E23a_E24a	KnownJunction	0	0.72	7.15	5.04	4.58	38.11	132.34	0.00
73	ER24a	ExonRegion	0	2.30	11.83	15.00	11.32	110.68	201.52	0.00
74	E24_Da	KnownBoundary	0	2.32	11.09	22.26	7.48	91.82	169.37	0.00
75	ER24b	ExonRegion	0	2.43	8.52	10.41	5.88	88.91	144.90	0.00