Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ME2	Gene	0	127.65	62.29	259.61	82.11	422.82	75.51	296.81
2	321341	Transcript	0	82.04	49.10	218.44	67.46	364.26	65.59	316.57
3	382927	Transcript	0	0.93	0.00	0.89	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	0	5.41	15.01	12.46	12.29	19.69	8.68	30.30
5	E1a_E2a	KnownJunction	1	14.97	35.34	29.93	30.72	48.30	16.16	76.80
6	ER2a	ExonRegion	0	58.00	53.73	121.65	57.76	163.14	50.82	164.47
7	E2a_E3a	KnownJunction	0	92.76	70.99	218.18	85.23	363.11	82.46	226.84
8	ER3a	ExonRegion	0	171.85	100.24	369.03	101.86	388.09	114.54	311.80
9	E3a_E4a	KnownJunction	0	185.79	98.73	405.24	108.74	321.54	125.42	303.18
10	ER4a	ExonRegion	0	175.22	71.28	399.44	82.79	507.82	82.07	320.23
11	E4a_E5a	KnownJunction	0	130.65	64.86	291.42	39.91	427.84	58.66	289.54
12	E4a_E7a	NovelJunction	0	1.60	1.52	8.59	9.62	0.00	5.76	0.73
13	ER5a	ExonRegion	0	122.46	81.87	304.73	75.65	427.06	78.17	365.35
14	E5a_E6a	KnownJunction	0	139.06	84.94	356.00	90.94	490.31	80.99	353.66
15	E6_Aa	NovelBoundary	1	64.14	1.00	149.70	1.46	2.01	0.00	2.34
16	ER6a	ExonRegion	0	201.31	103.35	415.49	128.98	706.31	94.08	461.35
17	E6a_E7a	KnownJunction	0	271.70	112.73	494.91	156.53	637.55	119.53	497.66
18	ER7a	ExonRegion	0	238.24	107.64	457.82	164.37	711.94	120.78	507.20
19	E7a_E8a	KnownJunction	0	250.77	98.52	397.40	118.74	716.41	92.78	460.08
20	ER8a	ExonRegion	0	216.09	91.92	357.57	102.17	672.85	83.43	412.83
21	E8a_E9a	KnownJunction	0	143.22	72.56	306.36	105.41	649.93	80.59	463.16
22	ER9a	ExonRegion	0	178.49	77.66	403.83	104.31	657.37	86.51	485.94
23	E9a_E10a	KnownJunction	0	178.20	64.50	392.77	118.23	466.59	90.53	391.78
24	ER10a	ExonRegion	0	124.39	65.06	303.72	110.42	378.96	83.66	380.45
25	E10a_E11a	KnownJunction	0	171.57	75.00	431.77	115.57	312.00	72.92	527.31
26	ER11a	ExonRegion	0	116.20	65.75	302.38	95.17	523.52	67.43	367.21
27	E11a_E12a	KnownJunction	0	84.50	65.07	192.99	67.65	395.26	40.39	264.57
28	ER12a	ExonRegion	0	70.26	59.62	204.00	86.35	340.22	66.52	315.21
29	E12a_E13a	KnownJunction	1	53.11	64.39	173.67	103.95	351.90	78.76	269.26
30	ER13a	ExonRegion	0	80.35	60.42	203.68	84.94	327.89	61.24	290.36
31	E13a_E14a	KnownJunction	0	79.19	43.22	243.48	58.65	471.96	35.05	306.88
32	E13a_E15a	NovelJunction	0	6.53	24.56	8.72	26.74	2.26	36.31	1.62
33	E13a_E16a	KnownJunction	0	0.93	0.00	0.89	0.00	0.00	0.00	0.00
34	ER14a	ExonRegion	0	67.50	42.31	195.11	50.30	355.30	45.83	302.47
35	E14a_E15a	KnownJunction	0	68.73	39.41	155.31	51.12	295.26	53.12	264.70
36	ER15a	ExonRegion	0	101.17	53.58	217.88	82.41	385.91	84.20	316.75
37	E15a_E16a	KnownJunction	0	93.58	66.97	280.41	94.82	312.87	109.75	392.06
38	ER16a	ExonRegion	0	138.02	51.57	236.10	74.96	443.56	83.75	260.55
39	IG43_AR1	ActiveIntergenicRegion	0	5.48	0.77	10.62	3.16	12.29	1.55	5.47
40	IG43_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	1.52	8.28	1.23	0.75
41	IG43_SR1	SilentIntergenicRegion	0	3.44	1.32	9.20	1.95	4.92	4.12	2.32
42	IG43_SR2	SilentIntergenicRegion	0	4.39	1.81	9.77	2.85	4.30	3.58	2.40
43	IG43_AR5	ActiveIntergenicRegion	0	3.02	1.14	12.02	3.20	3.23	4.32	4.40