Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TBCD	Gene	0	48.80	26.90	73.61	46.03	234.54	26.77	111.58
2	355528	Transcript	0	4.79	2.24	5.50	5.37	9.75	1.68	4.55
3	397466	Transcript	0	1.05	0.42	2.14	0.00	2.75	0.42	0.48
4	269368	Transcript	0	2.42	0.00	4.73	1.52	26.93	0.00	6.49
5	336211	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	334614	Transcript	0	0.83	0.71	0.85	0.48	7.03	0.20	1.79
7	ER1a	ExonRegion	0	0.94	1.16	1.02	0.96	1.73	0.84	2.82
8	ER1b	ExonRegion	0	6.84	7.53	16.68	18.71	40.50	10.63	20.63
9	E1a_E2a	KnownJunction	0	21.48	10.93	50.27	26.58	118.35	13.91	41.27
10	E1a_E3a	KnownJunction	0	2.42	0.00	4.73	1.52	26.93	0.00	6.49
11	ER2a	ExonRegion	0	27.69	16.41	75.35	29.12	195.06	13.63	68.21
12	E2a_E3a	KnownJunction	1	23.63	21.28	72.87	34.13	205.38	13.53	80.61
13	ER3a	ExonRegion	0	50.35	27.09	113.57	48.42	254.14	20.88	106.70
14	E3a_E4a	KnownJunction	0	66.36	35.41	136.33	47.79	195.28	24.25	110.31
15	ER4a	ExonRegion	0	73.82	41.96	147.60	47.92	278.23	27.66	125.08
16	E4a_E5a	KnownJunction	0	62.97	47.29	130.28	57.27	303.10	30.36	136.74
17	ER5a	ExonRegion	0	65.03	37.83	127.80	62.66	355.58	30.71	126.73
18	E5a_E6a	KnownJunction	0	55.34	33.79	122.49	50.01	395.70	30.58	121.82
19	ER6a	ExonRegion	0	45.78	40.74	114.26	54.24	302.35	26.95	127.12
20	E6a_E7a	KnownJunction	0	41.71	36.86	91.32	49.93	283.27	27.98	109.29
21	ER7a	ExonRegion	0	48.09	37.82	93.70	48.66	290.68	28.97	123.31
22	E7a_E8a	KnownJunction	0	37.54	21.91	89.60	39.99	285.09	16.35	96.79
23	ER8a	ExonRegion	0	42.18	31.67	98.68	47.11	336.46	20.15	103.83
24	E8a_E9a	KnownJunction	0	44.75	33.21	83.00	48.25	350.89	23.72	97.94
25	ER9a	ExonRegion	0	33.46	31.40	68.90	52.27	246.45	20.38	98.99
26	E9a_E10a	KnownJunction	0	35.17	16.13	73.82	44.51	203.00	28.60	110.50
27	ER10a	ExonRegion	0	25.25	27.52	49.85	50.38	205.68	25.59	92.81
28	E10a_E11a	KnownJunction	0	29.82	22.86	50.12	52.04	247.93	20.02	94.76
29	ER11a	ExonRegion	0	28.95	28.44	65.57	59.00	227.14	28.22	112.30
30	E11a_E12a	KnownJunction	0	35.08	34.78	76.08	48.55	217.43	33.37	126.32
31	ER12a	ExonRegion	0	27.21	28.27	63.13	51.71	239.56	21.84	118.85
32	E12a_E13a	KnownJunction	0	27.97	21.86	59.31	48.22	267.80	17.53	106.47
33	E13_Aa	NovelBoundary	1	11.88	0.00	21.83	1.35	3.02	0.00	0.82
34	ER13a	ExonRegion	0	27.83	21.64	54.13	44.26	221.12	23.91	107.40
35	E13a_E14a	KnownJunction	0	27.97	21.83	56.72	21.13	231.87	18.84	96.18
36	ER14a	ExonRegion	0	42.95	25.54	66.76	46.34	265.74	23.03	115.10
37	E14a_E15a	KnownJunction	0	50.35	39.09	94.60	44.73	313.50	38.14	110.09
38	ER15a	ExonRegion	0	47.35	44.17	91.25	49.62	246.99	29.17	130.21
39	E15a_E16a	KnownJunction	0	41.86	31.21	58.33	37.87	238.78	14.58	131.18
40	E16a_E17a	KnownJunction	0	60.28	32.76	82.39	53.32	309.97	17.69	125.94
41	ER16a	ExonRegion	0	58.27	41.18	89.89	61.31	297.76	21.66	160.17
42	ER17a	ExonRegion	0	78.80	38.64	116.32	65.29	369.08	37.49	166.00
43	E17a_E18a	KnownJunction	0	83.43	42.06	130.27	69.16	392.57	43.87	161.76
44	E17a_E19a	NovelJunction	0	2.07	1.52	5.72	5.69	20.49	1.66	2.87
45	ER18a	ExonRegion	0	57.36	36.33	97.77	51.03	263.18	38.16	151.68
46	E18a_E19a	KnownJunction	0	56.85	23.33	80.47	38.60	203.60	27.82	133.07
47	ER19a	ExonRegion	0	45.47	23.10	69.51	37.83	224.76	31.68	131.03
48	E19a_E20a	KnownJunction	0	47.55	29.71	76.16	38.63	270.62	47.97	134.82
49	ER20a	ExonRegion	0	72.96	34.07	111.86	41.68	331.94	35.34	153.58
50	E20a_E21a	KnownJunction	0	68.20	30.50	101.02	42.29	368.96	21.90	132.79
51	ER21a	ExonRegion	0	83.05	28.54	118.60	45.95	373.41	20.28	156.23
52	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	E21a_E23a	KnownJunction	0	65.26	14.48	79.53	31.62	240.16	14.28	108.88
54	ER22a	ExonRegion	0	2.10	0.83	4.28	0.00	5.51	0.84	0.96
55	E23a_E24a	KnownJunction	0	46.05	16.42	76.16	27.17	230.30	21.68	91.26
56	ER23a	ExonRegion	0	96.92	25.09	142.96	50.58	309.15	26.33	185.54
57	ER24a	ExonRegion	0	110.46	40.17	171.86	60.67	357.60	35.55	219.28
58	E24a_E25a	KnownJunction	0	100.42	44.92	146.39	64.96	407.51	30.39	196.74
59	ER25a	ExonRegion	0	121.45	42.62	172.00	64.72	410.29	32.01	211.15
60	E25a_E26a	KnownJunction	0	117.41	29.79	177.82	71.14	365.64	27.66	195.04
61	ER26a	ExonRegion	0	104.61	30.94	157.71	78.70	411.66	35.38	203.70
62	E26a_E27a	KnownJunction	0	88.76	32.24	142.64	65.45	358.47	29.29	187.43
63	E26a_E28a	NovelJunction	0	0.80	2.31	4.38	8.59	3.09	2.33	3.34
64	ER27a	ExonRegion	0	89.47	30.86	126.85	53.42	291.98	30.72	178.41
65	E27a_E28a	KnownJunction	0	65.96	29.61	106.86	57.32	379.20	30.82	164.07
66	ER28a	ExonRegion	0	60.77	33.24	112.45	62.22	301.01	32.63	160.29
67	E28a_E29a	KnownJunction	0	82.10	33.00	124.17	80.65	327.21	50.22	183.07
68	ER29a	ExonRegion	0	76.61	45.45	124.32	78.50	312.01	42.62	182.46
69	E29a_E30a	KnownJunction	0	66.81	42.53	115.87	71.90	315.73	44.35	171.09
70	ER30a	ExonRegion	0	82.85	48.25	115.71	74.50	481.35	41.02	209.01
71	E30a_E31a	KnownJunction	0	85.32	47.13	91.70	91.13	257.96	58.18	261.22
72	ER31a	ExonRegion	0	69.72	42.51	84.79	80.44	364.39	51.83	225.34
73	E31a_E32a	KnownJunction	0	93.58	35.99	104.21	66.70	429.04	32.35	211.04
74	ER32a	ExonRegion	0	98.31	44.61	100.38	78.57	473.17	54.08	261.31
75	E32a_E33a	KnownJunction	0	89.57	36.70	90.35	84.28	331.59	55.53	199.85
76	ER33a	ExonRegion	0	89.34	32.77	80.99	60.81	373.15	39.73	168.93
77	E33a_E34a	KnownJunction	0	69.50	30.97	68.99	56.46	272.90	30.87	127.08
78	ER34a	ExonRegion	0	81.19	25.99	83.67	53.85	270.88	32.99	122.56
79	E34a_E35a	KnownJunction	0	77.06	28.08	88.68	47.90	190.90	44.92	111.01
80	ER35a	ExonRegion	0	63.69	29.08	81.11	44.87	235.26	34.52	116.86
81	E35a_E36a	KnownJunction	0	62.52	34.97	80.96	45.51	227.69	24.92	113.53
82	E35a_E39a	NovelJunction	0	0.00	0.00	0.00	8.29	0.00	5.63	0.00
83	ER36a	ExonRegion	0	62.44	32.95	84.88	55.71	325.66	30.39	133.09
84	E36a_E37a	KnownJunction	0	0.00	0.00	0.70	1.25	9.06	0.00	1.32
85	E36a_E38a	KnownJunction	0	76.34	34.28	85.16	67.73	419.24	43.31	157.33
86	E36a_E39a	NovelJunction	0	0.62	5.44	2.30	6.85	1.18	12.35	1.58
87	ER37a	ExonRegion	0	1.24	1.19	1.88	0.67	9.26	0.82	3.25
88	E37a_E38a	KnownJunction	0	2.07	1.63	0.83	0.00	9.80	0.00	2.58
89	ER38a	ExonRegion	0	67.44	33.84	70.70	60.21	298.00	37.25	144.32
90	E38a_E39a	KnownJunction	0	45.40	26.95	78.33	61.23	186.61	36.80	123.01
91	ER39a	ExonRegion	0	54.53	46.20	67.32	70.90	250.75	49.96	134.12
92	E39a_E40a	KnownJunction	0	83.28	46.58	68.96	65.99	276.06	56.57	136.36
93	ER40a	ExonRegion	0	58.53	35.08	57.37	69.38	298.42	54.08	115.32
94	E40_Da	NovelBoundary	0	28.71	18.86	42.38	53.34	189.93	27.42	60.54
95	E40a_E40b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
96	E40c_E41a	KnownJunction	0	39.52	42.19	39.42	62.23	160.75	37.98	74.68
97	ER40b	ExonRegion	0	36.73	35.47	45.93	63.84	239.23	40.21	80.55
98	ER40c	ExonRegion	0	33.86	36.12	40.73	63.10	195.01	36.13	76.14
99	ER40d	ExonRegion	0	33.04	36.45	35.90	63.60	171.69	34.33	79.60
100	ER41a	ExonRegion	0	35.99	33.13	39.56	56.73	141.58	42.67	87.04
101	E41_Da	KnownBoundary	1	37.87	22.62	45.81	61.31	125.73	54.62	90.92
102	ER41b	ExonRegion	1	26.10	14.32	34.75	34.85	98.32	30.72	47.36
103	E41_Db	KnownBoundary	1	12.07	7.41	15.97	14.36	27.06	1.10	12.86
104	ER41c	ExonRegion	0	8.63	3.33	9.99	9.77	17.77	2.53	6.27
105	ER42a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00