Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PGS1	Gene	0	41.33	92.70	64.06	96.18	94.06	44.63	38.74
2	262764	Transcript	0	40.16	59.48	72.21	66.36	66.05	37.93	27.76
3	329897	Transcript	0	12.88	26.78	17.31	34.91	12.91	14.78	9.69
4	335081	Transcript	0	45.68	64.26	41.49	63.75	61.87	26.69	32.00
5	ER1a	ExonRegion	0	0.00	8.50	0.00	4.36	0.00	2.45	0.00
6	ER1b	ExonRegion	0	7.72	50.14	8.71	42.29	11.12	16.74	4.05
7	E1a_E2a	KnownJunction	0	5.36	80.94	11.88	64.04	8.41	28.70	9.16
8	ER2a	ExonRegion	0	47.02	87.74	83.38	110.42	92.43	50.03	35.10
9	E2a_E3a	KnownJunction	0	44.28	58.80	116.57	76.97	88.55	40.04	40.46
10	E2a_E4a	KnownJunction	0	15.69	43.48	23.15	73.90	16.71	27.98	7.70
11	ER3a	ExonRegion	0	47.45	73.42	92.96	82.99	69.00	48.11	36.19
12	E3a_E4a	KnownJunction	1	75.67	88.11	99.24	86.64	99.01	50.71	34.30
13	ER4a	ExonRegion	0	100.86	156.36	165.60	158.40	151.43	82.13	66.18
14	E4a_E5a	KnownJunction	0	61.07	151.38	128.10	156.91	155.77	70.86	69.22
15	ER5a	ExonRegion	0	67.34	141.59	96.93	130.92	143.39	69.23	57.79
16	E5a_E6a	KnownJunction	0	33.73	156.87	51.69	110.29	141.06	53.65	62.26
17	E5a_E7a	NovelJunction	1	4.14	8.46	3.13	12.81	8.37	1.66	2.51
18	ER6a	ExonRegion	0	38.29	145.64	62.13	122.27	100.98	53.07	48.40
19	E6a_E7a	KnownJunction	0	28.19	125.45	63.00	108.66	103.48	49.69	54.32
20	ER7a	ExonRegion	0	26.52	111.08	56.51	116.57	101.84	50.25	44.74
21	E7_Ab	KnownBoundary	0	50.64	112.86	80.27	126.87	91.59	52.93	48.91
22	ER7b	ExonRegion	0	40.34	104.21	64.54	100.93	102.97	42.35	41.17
23	E7_Da	KnownBoundary	0	16.07	34.31	26.51	41.45	46.41	18.44	13.46
24	E7a_E7c	KnownJunction	0	19.88	40.93	31.38	42.51	0.00	21.57	16.55
25	E7_Ac	KnownBoundary	1	14.52	40.27	24.13	31.59	36.01	5.68	14.27
26	ER7c	ExonRegion	0	34.58	77.51	53.11	81.55	95.24	26.48	30.63
27	ER7d	ExonRegion	0	34.39	73.09	43.73	79.97	88.55	29.85	35.78
28	E7b_E8a	KnownJunction	0	24.57	46.45	33.21	44.70	77.69	17.96	26.51
29	E7b_E8b	KnownJunction	0	13.64	19.05	11.32	19.48	34.93	5.90	13.17
30	E7b_E9a	NovelJunction	0	0.92	15.21	2.21	23.05	3.53	5.76	2.24
31	ER8a	ExonRegion	0	31.23	58.81	38.57	50.70	94.61	15.14	37.50
32	E8_Ab	KnownBoundary	0	36.77	60.29	40.96	59.79	86.45	21.55	36.82
33	ER8b	ExonRegion	0	47.73	80.86	70.21	98.56	120.25	37.27	58.95
34	E8a_E9a	KnownJunction	0	54.11	86.09	73.79	112.81	82.64	37.73	50.86
35	ER9a	ExonRegion	0	59.66	91.26	64.52	109.02	107.56	40.83	49.94
36	E9_Da	KnownBoundary	0	18.74	34.42	17.89	39.93	36.68	12.25	12.91
37	E9a_E9b	KnownJunction	0	45.68	64.26	41.49	63.75	61.87	26.69	32.00
38	E9_Ab	KnownBoundary	0	19.23	36.70	26.15	41.80	41.70	13.45	23.20
39	ER9b	ExonRegion	0	48.92	83.42	52.61	83.96	124.18	29.42	44.97
40	ER9c	ExonRegion	0	36.34	61.75	44.13	53.79	125.50	23.06	39.85
41	E9_Db	NovelBoundary	0	10.16	23.67	12.52	28.12	23.40	12.30	17.66
42	E9b_E10a	KnownJunction	0	19.83	37.38	33.63	29.50	85.94	17.29	31.07
43	E9_Dc	NovelBoundary	1	14.35	13.66	17.33	47.03	21.58	11.60	12.41
44	ER9d	ExonRegion	0	2.31	3.64	3.39	3.74	0.00	3.68	1.35
45	I9	Intron	1	11.37	19.24	15.40	14.39	31.42	7.10	11.78
46	I9_AR1	ActiveIntronRegion	1	12.37	20.22	16.09	14.96	32.40	7.57	12.29
47	I9_AR2	ActiveIntronRegion	1	7.67	16.19	13.40	12.80	29.18	5.48	10.31
48	E10_Aa	NovelBoundary	0	12.05	19.70	21.44	19.02	34.63	6.41	10.49
49	ER10a	ExonRegion	0	25.06	62.51	40.02	86.71	86.38	33.20	31.79
50	E10_Da	KnownBoundary	0	27.72	54.04	36.92	78.21	73.19	45.93	26.18
51	ER10b	ExonRegion	0	33.42	68.55	52.26	80.85	73.70	48.34	27.85