Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CPSF4L	Gene	0	5.82	2.11	0.11	1.01	0.15	1.84	0.77
2	397671	Transcript	0	3.38	1.62	0.13	0.48	0.01	0.89	0.42
3	344935	Transcript	0	1.06	0.00	0.00	1.55	0.24	2.17	0.34
4	IG26	Intergenic	0	22.94	9.98	3.76	7.56	0.61	9.49	3.19
5	IG26_SR1	SilentIntergenicRegion	0	22.95	9.98	3.76	7.56	0.61	9.49	3.19
6	ER1a	ExonRegion	0	6.52	2.26	0.00	1.55	0.00	3.41	0.42
7	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	1.13	0.00	0.00	1.46	0.72	4.86	1.03
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	3.20	0.00	1.66	0.00
10	ER3a	ExonRegion	0	0.00	0.05	0.00	0.76	0.17	1.71	0.87
11	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	1.36
12	I3	Intron	0	11.81	3.36	0.69	0.75	0.21	1.64	0.20
13	I3_SR1	SilentIntronRegion	0	11.82	3.36	0.69	0.75	0.21	1.64	0.20
14	ER4a	ExonRegion	0	5.52	6.61	0.34	2.51	0.38	1.64	1.99
15	E4_Da	NovelBoundary	0	10.46	1.23	1.58	0.00	0.00	1.66	1.38
16	E4a_E5a	KnownJunction	0	0.00	0.97	0.00	0.00	1.18	1.13	0.56
17	ER5a	ExonRegion	0	2.79	3.77	0.00	0.95	0.25	0.83	0.61
18	E5a_E6a	KnownJunction	0	0.92	4.68	0.00	0.00	0.00	0.00	1.61
19	ER5b	ExonRegion	0	2.04	0.00	0.00	0.00	0.00	0.00	0.00
20	I5	Intron	0	11.74	3.15	0.47	1.49	0.05	0.48	0.60
21	I5_SR1	SilentIntronRegion	0	11.77	3.16	0.47	1.49	0.05	0.48	0.60
22	E6_Aa	NovelBoundary	0	19.74	2.44	0.73	1.30	0.00	0.00	0.00
23	ER6a	ExonRegion	0	8.47	4.96	1.05	1.89	0.00	1.90	0.55
24	E6_Da	NovelBoundary	0	32.65	4.26	0.00	0.00	0.00	1.23	0.89
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I6	Intron	0	9.52	2.53	0.57	0.23	0.27	0.83	0.58
27	I6_SR1	SilentIntronRegion	0	9.53	2.54	0.57	0.23	0.27	0.83	0.58
28	E7_Aa	NovelBoundary	0	12.50	1.10	1.52	0.00	0.00	0.00	2.26
29	ER7a	ExonRegion	0	3.03	0.00	0.00	0.00	0.00	0.68	0.00
30	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	I7	Intron	0	11.63	2.33	0.41	0.14	0.00	0.42	0.38
32	I7_SR1	SilentIntronRegion	0	11.66	2.34	0.41	0.14	0.00	0.42	0.38
33	E8_Aa	NovelBoundary	0	20.04	5.49	0.00	0.00	0.00	0.00	1.32
34	ER8a	ExonRegion	0	8.12	1.10	0.00	0.38	0.08	1.10	0.82