Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EXOC7	Gene	0	87.22	76.41	107.06	139.57	113.22	67.10	120.66
2	332065	Transcript	0	0	0	0	0	0	0	0
3	357231	Transcript	1	6.79	1.02	13.31	9.40	28.38	1.39	5.69
4	405575	Transcript	1	77.81	10.93	86.57	30.02	8.69	9.11	2.12
5	405068	Transcript	1	21.91	16.71	16.40	7.82	11.07	3.85	12.63
6	406660	Transcript	0	0.62	2.58	2.86	2.00	1.53	2.44	1.56
7	335146	Transcript	0	12.93	4.38	5.88	2.86	3.27	0.57	5.52
8	351709	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	IG43_AR2	ActiveIntergenicRegion	0	0.00	1.46	0.28	0.47	7.54	0.72	0.00
10	ER1a	ExonRegion	0	7.27	6.84	6.28	10.31	4.99	3.64	2.72
11	E1_Ac	KnownBoundary	0	3.96	3.10	6.21	0.00	1.11	0.00	0.00
12	E1_Ad	KnownBoundary	0	9.55	4.41	6.98	4.96	2.35	0.00	0.00
13	E1_Ae	KnownBoundary	0	50.79	53.78	50.63	62.50	128.66	26.16	54.88
14	ER1b	ExonRegion	0	26.64	22.27	22.13	29.93	34.55	10.22	17.76
15	ER1c	ExonRegion	0	33.73	32.94	30.48	38.52	53.90	14.71	29.38
16	ER1d	ExonRegion	0	46.28	47.75	47.73	64.84	101.54	24.90	46.96
17	ER1e	ExonRegion	0	50.41	74.91	65.00	115.02	106.22	45.49	97.69
18	E1a_E2a	KnownJunction	1	27.25	61.37	24.99	64.10	37.25	34.54	64.26
19	ER2a	ExonRegion	0	39.09	124.52	59.45	115.87	50.01	74.71	111.57
20	E2a_E3a	KnownJunction	0	72.50	172.50	106.54	189.12	75.41	118.43	155.98
21	ER3a	ExonRegion	0	105.58	174.26	169.28	241.42	192.25	142.68	244.87
22	E3_Da	KnownBoundary	1	113.51	180.72	217.70	273.21	177.90	170.66	248.87
23	E3a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER3b	ExonRegion	0	97.18	190.35	206.67	264.08	160.83	170.57	250.95
25	E3b_E4a	KnownJunction	1	79.24	179.20	183.93	252.43	154.87	170.71	236.05
26	ER4a	ExonRegion	0	146.88	215.72	221.75	310.46	227.46	194.25	303.00
27	E4_Da	KnownBoundary	0	4.21	4.83	3.68	8.56	5.33	3.99	4.06
28	E4a_E5a	KnownJunction	0	226.93	203.05	277.95	320.98	234.54	182.91	321.00
29	ER4b	ExonRegion	0	0.62	2.58	2.86	2.00	1.53	2.44	1.56
30	ER5a	ExonRegion	0	189.25	197.83	264.78	304.61	325.98	153.13	349.14
31	E5_Ab	KnownBoundary	1	162.86	178.49	242.93	261.59	320.25	132.58	320.94
32	ER5b	ExonRegion	0	180.44	196.82	233.26	308.83	236.05	159.42	307.35
33	E5a_E6a	KnownJunction	0	178.38	176.91	212.41	284.92	292.59	157.10	288.79
34	ER6a	ExonRegion	0	168.57	194.65	242.06	293.06	298.01	158.86	332.52
35	E6_Da	KnownBoundary	0	16.11	10.30	15.18	6.07	4.01	5.76	14.86
36	E6a_E7a	KnownJunction	1	71.92	13.42	98.12	22.35	31.01	7.64	7.88
37	E6a_E8b	NovelJunction	1	38.29	16.13	34.53	9.21	1.08	1.18	29.15
38	E6a_E9a	KnownJunction	1	41.62	149.51	80.53	231.82	203.81	130.51	231.51
39	ER6b	ExonRegion	1	21.91	16.71	16.40	7.82	11.07	3.85	12.63
40	E6_Db	NovelBoundary	0	456.34	495.74	423.81	513.48	362.25	510.96	343.31
41	I6	Intron	0	29.06	10.83	17.99	4.84	8.88	2.64	11.01
42	I6_SR1	SilentIntronRegion	0	20.90	10.78	14.60	4.63	8.09	2.58	11.64
43	I6_AR1	ActiveIntronRegion	0	40.80	10.94	22.89	5.16	10.03	2.73	10.14
44	E7_Aa	NovelBoundary	1	59.43	17.50	31.34	16.25	11.62	6.11	17.07
45	ER7a	ExonRegion	1	122.78	22.43	124.56	37.33	42.05	12.63	10.92
46	E7_Da	NovelBoundary	1	78.03	25.85	30.58	11.13	19.53	6.65	17.51
47	E7a_E8a	KnownJunction	0	2.92	0.00	2.30	0.00	0.00	0.00	0.00
48	E7a_E8b	KnownJunction	1	77.81	10.93	86.57	30.02	8.69	9.11	2.12
49	E7a_E9a	KnownJunction	0	6.79	1.02	13.31	9.40	28.38	1.39	5.69
50	I7	Intron	1	21.97	15.18	10.63	6.72	7.01	2.53	8.17
51	I7_AR1	ActiveIntronRegion	0	22.03	15.23	10.66	6.74	7.03	2.54	8.19
52	ER8a	ExonRegion	1	22.94	8.76	9.45	5.72	6.54	1.14	11.05
53	E8_Ab	KnownBoundary	1	40.99	11.48	17.69	11.00	11.55	1.13	17.74
54	ER8b	ExonRegion	1	103.37	34.41	88.43	34.91	15.78	11.14	28.65
55	E8a_E9a	KnownJunction	1	99.57	42.87	74.31	27.55	11.20	6.35	37.62
56	E9_Aa	NovelBoundary	0	26.64	15.95	35.65	3.98	8.90	0.99	16.29
57	ER9a	ExonRegion	0	158.51	205.59	187.33	284.14	282.51	141.39	334.67
58	E9a_E10a	KnownJunction	0	144.00	188.81	181.94	321.84	337.47	139.79	343.58
59	ER10a	ExonRegion	0	153.84	203.48	180.08	290.97	267.62	133.34	381.19
60	E10a_E11a	KnownJunction	0	118.16	179.59	141.71	268.15	210.98	108.54	268.13
61	ER11a	ExonRegion	0	146.19	172.53	174.08	279.55	285.91	103.37	329.87
62	E11_Da	NovelBoundary	0	8.38	21.96	18.26	28.47	27.59	12.52	18.03
63	E11a_E12a	KnownJunction	0	152.15	141.94	150.83	272.35	378.99	92.78	345.54
64	E11a_E13a	NovelJunction	0	2.64	7.22	5.95	13.27	5.76	9.46	13.36
65	ER12a	ExonRegion	0	153.36	139.27	173.84	242.05	314.24	102.26	319.54
66	E12a_E13a	KnownJunction	0	167.28	123.19	192.06	201.04	188.32	100.58	285.35
67	ER13a	ExonRegion	0	145.25	136.50	154.70	217.57	140.78	75.46	246.54
68	E13a_E14a	KnownJunction	0	115.11	149.33	136.72	227.46	114.55	78.82	211.02
69	ER14a	ExonRegion	0	108.05	129.75	154.97	230.54	178.06	87.79	195.39
70	E14a_E15a	KnownJunction	0	108.28	136.16	157.57	216.05	213.82	102.91	212.39
71	ER15a	ExonRegion	0	149.29	159.11	204.30	257.59	250.18	114.77	289.90
72	E15a_E16a	KnownJunction	0	126.34	125.76	188.44	227.48	162.59	101.20	200.11
73	ER16a	ExonRegion	0	112.04	134.09	190.65	246.30	162.86	121.53	216.38
74	E16a_E17a	KnownJunction	0	130.98	160.89	191.40	294.24	109.59	129.68	200.60
75	E17_Aa	NovelBoundary	1	56.61	0.00	72.81	6.01	3.18	0.00	3.71
76	ER17a	ExonRegion	0	131.89	146.26	200.34	264.92	157.16	137.83	222.69
77	E17a_E18a	KnownJunction	0	112.01	109.37	172.40	194.65	181.82	102.29	210.21
78	ER18a	ExonRegion	0	144.39	125.71	196.70	219.58	204.68	121.90	239.96
79	E18a_E19a	KnownJunction	0	125.36	108.37	171.96	198.47	235.74	92.59	186.70
80	ER19a	ExonRegion	0	175.73	136.50	242.37	241.64	230.41	116.98	233.07
81	E19a_E20a	KnownJunction	0	166.63	140.87	204.09	305.89	199.11	122.98	209.60
82	ER20a	ExonRegion	0	178.57	140.72	216.71	262.48	202.98	106.09	221.66
83	E20_Da	KnownBoundary	0	128.31	110.66	148.86	207.54	143.04	75.47	131.78
84	ER20b	ExonRegion	0	105.54	67.57	126.95	179.43	127.88	84.51	111.38