Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COX11	Gene	0	40.27	21.95	50.09	34.40	117.56	16.94	61.50
2	299335	Transcript	0	5.60	5.45	8.57	5.53	13.64	2.28	9.71
3	393171	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	3.38	3.19	5.17	4.70	16.99	0.66	4.71
5	E1_Ab	KnownBoundary	0	12.13	7.49	14.51	14.66	59.11	5.57	16.65
6	ER1b	ExonRegion	0	20.15	29.77	32.06	44.08	106.07	18.40	54.03
7	E1a_E2a	KnownJunction	0	31.19	45.71	53.18	55.54	135.55	29.51	82.74
8	I1_AR3	ActiveIntronRegion	1	6.28	8.50	0.90	1.25	0.81	0.00	2.70
9	ER2a	ExonRegion	0	52.58	47.09	85.42	88.85	219.32	34.41	117.13
10	E2a_E3a	KnownJunction	0	56.20	47.79	104.98	96.69	303.12	33.42	112.32
11	I2_AR1	ActiveIntronRegion	1	13.40	3.53	5.71	0.86	13.84	0.34	11.58
12	E3_Aa	NovelBoundary	1	20.26	5.70	7.63	5.66	17.98	0.00	24.38
13	ER3a	ExonRegion	0	80.51	41.33	107.48	79.83	318.46	28.16	127.50
14	E3_Da	NovelBoundary	1	54.34	11.56	14.54	20.67	71.76	3.32	49.57
15	E3a_E4a	KnownJunction	1	65.62	25.77	93.18	85.69	279.03	35.19	82.55
16	I3	Intron	1	50.45	14.90	17.01	9.48	66.13	2.63	39.62
17	I3_AR1	ActiveIntronRegion	1	50.69	14.97	17.09	9.52	66.44	2.64	39.81
18	E4_Aa	NovelBoundary	1	33.71	15.32	15.39	8.51	46.06	2.71	32.98
19	ER4a	ExonRegion	0	75.34	30.00	89.23	48.45	192.72	29.52	98.92
20	E4_Da	KnownBoundary	0	25.80	9.72	23.47	13.11	71.28	4.48	28.98
21	ER4b	ExonRegion	0	10.73	6.11	10.30	5.62	18.29	1.57	17.86
22	E4_Db	NovelBoundary	1	4.59	11.77	10.32	4.09	38.18	0.00	7.08
23	E4b_E5a	KnownJunction	0	1.00	3.97	8.74	5.12	4.20	4.96	7.65
24	ER5a	ExonRegion	0	7.30	8.52	10.06	6.68	15.09	1.92	8.63