Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NUP85	Gene	0	64.13	42.78	101.50	52.87	217.99	36.10	70.59
2	245544	Transcript	0	71.13	44.83	112.87	57.88	228.30	37.85	75.41
3	IG12_AR3	ActiveIntergenicRegion	0	18.29	13.32	25.52	10.57	55.09	16.73	13.51
4	IG12_SR4	SilentIntergenicRegion	0	4.09	2.07	2.16	1.87	8.95	1.45	4.23
5	IG12_AR5	ActiveIntergenicRegion	0	134.36	37.85	110.99	24.99	1782.34	39.54	48.05
6	IG12_SR10	SilentIntergenicRegion	0	8.92	3.12	7.33	3.74	11.94	2.20	2.71
7	IG12_SR11	SilentIntergenicRegion	0	4.63	4.80	3.67	3.54	3.39	8.70	0.92
8	IG12_AR7	ActiveIntergenicRegion	0	1.27	4.21	2.61	14.62	8.49	29.00	0.49
9	IG12_SR12	SilentIntergenicRegion	0	0.17	2.59	0.73	7.06	0.37	17.94	0.05
10	IG12_AR8	ActiveIntergenicRegion	0	20.63	18.92	48.13	14.94	122.53	18.84	43.83
11	ER1a	ExonRegion	0	16.80	6.89	20.79	11.27	65.06	2.10	17.91
12	E1a_E2a	KnownJunction	1	37.35	15.08	45.31	34.05	68.03	5.47	29.18
13	ER2a	ExonRegion	0	26.25	22.32	39.32	29.24	62.39	9.52	33.46
14	E2a_E3a	KnownJunction	0	65.86	27.53	95.42	40.56	121.05	20.02	72.36
15	ER3a	ExonRegion	0	107.16	37.00	189.02	52.30	247.30	34.79	88.42
16	E3a_E4a	KnownJunction	1	117.20	53.91	212.91	63.23	211.21	46.34	75.81
17	ER4a	ExonRegion	0	107.30	50.84	206.60	73.38	241.39	37.59	82.22
18	E4a_E5a	KnownJunction	0	62.07	41.14	154.11	52.34	221.15	24.58	70.40
19	ER5a	ExonRegion	0	67.54	42.46	145.24	57.64	190.70	24.91	76.08
20	E5a_E6a	KnownJunction	0	91.24	33.42	143.80	53.94	222.60	24.76	67.57
21	ER6a	ExonRegion	0	87.49	33.81	147.03	45.41	217.33	24.12	66.31
22	E6a_E7a	KnownJunction	0	70.51	27.53	114.56	35.98	175.96	20.29	60.55
23	E7_Aa	NovelBoundary	1	23.83	6.80	41.70	0.00	6.18	0.00	3.34
24	ER7a	ExonRegion	0	55.79	32.44	95.81	56.46	232.81	25.98	60.06
25	E7a_E8a	KnownJunction	0	59.45	36.73	101.79	38.82	212.13	20.80	58.60
26	E7a_E9a	NovelJunction	0	4.91	0.00	4.57	1.49	13.30	0.00	3.80
27	ER8a	ExonRegion	0	46.42	42.66	76.00	49.44	206.73	33.09	57.06
28	E8_Da	NovelBoundary	1	1.70	12.35	2.82	0.00	6.55	5.39	10.45
29	E8a_E9a	KnownJunction	0	72.38	48.97	108.29	50.99	276.38	34.54	82.22
30	I8	Intron	0	0.56	8.84	0.00	1.80	5.13	3.58	1.46
31	I8_SR1	SilentIntronRegion	0	0.57	9.02	0.00	1.83	5.22	3.65	1.49
32	ER9a	ExonRegion	0	60.63	65.90	105.82	64.87	280.43	46.47	80.19
33	E9_Da	NovelBoundary	0	9.91	13.50	8.52	6.18	5.21	7.58	12.51
34	E9a_E10a	KnownJunction	0	73.65	54.62	102.37	62.74	222.99	33.66	68.05
35	I9	Intron	0	5.15	9.08	4.40	3.24	8.98	7.12	11.09
36	I9_SR1	SilentIntronRegion	0	5.21	9.17	4.45	3.28	9.09	7.20	11.20
37	E10_Aa	NovelBoundary	1	4.02	13.00	4.01	3.06	7.17	1.58	9.36
38	ER10a	ExonRegion	0	110.21	68.81	161.00	70.74	391.36	48.49	123.21
39	E10a_E11a	KnownJunction	0	84.47	65.97	132.41	70.76	283.20	45.37	98.20
40	E11_Aa	NovelBoundary	0	19.59	10.27	20.46	6.75	22.94	7.40	10.59
41	ER11a	ExonRegion	0	86.70	55.19	126.89	56.17	311.47	46.82	113.53
42	E11a_E12a	KnownJunction	0	76.11	52.88	112.56	51.39	350.24	26.83	110.90
43	I11	Intron	0	12.99	11.67	15.86	4.88	8.31	3.49	5.22
44	I11_AR1	ActiveIntronRegion	0	20.09	7.62	23.66	8.97	6.65	3.19	6.32
45	I11_SR2	SilentIntronRegion	0	18.88	9.91	22.23	3.04	6.31	3.37	3.84
46	I11_AR2	ActiveIntronRegion	0	14.70	15.63	22.23	9.01	11.15	5.55	6.65
47	I11_SR3	SilentIntronRegion	1	8.26	13.37	6.74	1.41	8.05	2.26	5.59
48	E12_Aa	NovelBoundary	1	42.54	7.99	48.43	4.96	6.27	11.71	2.85
49	ER12a	ExonRegion	0	78.98	69.04	112.87	62.63	332.66	47.07	119.68
50	E12a_E13a	KnownJunction	0	59.02	53.88	85.03	60.30	267.53	42.08	95.06
51	ER13a	ExonRegion	0	61.24	43.15	88.62	61.03	238.51	55.86	89.31
52	E13a_E14a	KnownJunction	1	59.77	29.16	107.16	68.97	192.81	75.17	85.60
53	I13_AR1	ActiveIntronRegion	0	5.38	11.74	0.79	3.74	0.00	4.29	5.40
54	E14_Aa	NovelBoundary	1	0.88	15.92	2.53	1.46	0.00	3.75	0.89
55	ER14a	ExonRegion	0	59.20	50.32	98.85	74.26	243.06	57.94	87.39
56	E14_Da	NovelBoundary	1	8.11	16.58	4.27	0.00	2.33	0.00	1.53
57	E14a_E15a	KnownJunction	0	71.70	48.92	140.02	88.86	313.80	63.78	93.70
58	I14	Intron	1	4.97	12.11	3.16	1.36	7.46	1.45	6.29
59	I14_SR1	SilentIntronRegion	1	5.26	11.47	1.29	1.06	4.80	1.69	3.52
60	I14_AR1	ActiveIntronRegion	1	4.86	12.45	4.05	1.50	8.74	1.34	7.61
61	ER15a	ExonRegion	0	66.09	55.46	108.13	75.93	275.47	58.68	88.52
62	E15a_E16a	KnownJunction	0	66.51	55.93	98.11	95.41	202.93	53.17	84.77
63	ER16a	ExonRegion	0	86.64	50.37	118.90	84.48	289.90	64.99	92.53
64	E16a_E17a	KnownJunction	0	101.09	53.57	122.88	80.24	355.91	36.64	86.81
65	E17_Aa	NovelBoundary	1	4.37	17.34	6.61	5.31	11.57	2.97	4.39
66	ER17a	ExonRegion	0	86.09	64.53	121.23	80.56	290.30	50.35	93.11
67	E17_Da	NovelBoundary	1	14.25	27.32	12.99	6.47	29.14	2.63	18.34
68	E17a_E18a	KnownJunction	0	88.97	43.98	100.26	67.08	166.00	35.78	52.12
69	I17	Intron	1	6.93	14.82	8.91	6.68	21.96	3.30	18.42
70	I17_AR1	ActiveIntronRegion	1	6.98	14.92	8.97	6.72	22.09	3.32	18.54
71	E18_Aa	NovelBoundary	1	10.28	14.06	6.64	10.05	14.98	1.21	11.09
72	ER18a	ExonRegion	0	73.42	52.89	109.44	56.86	206.61	42.27	59.87
73	E18_Da	NovelBoundary	1	6.19	15.66	5.95	1.30	9.45	0.00	6.03
74	E18a_E19a	KnownJunction	0	60.20	44.19	83.06	42.97	180.71	57.38	47.98
75	I18	Intron	1	10.98	12.02	4.25	2.77	7.01	1.98	6.26
76	I18_AR1	ActiveIntronRegion	1	11.55	12.68	4.49	2.87	7.33	2.11	6.60
77	ER19a	ExonRegion	0	30.16	27.01	44.55	20.20	79.11	22.67	21.47