Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AKAP1	Gene	0	106.15	74.83	201.49	76.69	318.55	18.23	92.81
2	314126	Transcript	0	5.28	1.85	8.55	0.92	16.30	0.00	0.00
3	337714	Transcript	0	158.42	95.79	265.80	102.62	529.38	22.98	140.35
4	ER1a	ExonRegion	0	1.05	7.65	2.77	10.71	10.05	1.98	5.00
5	E1a_E2a	KnownJunction	0	10.01	21.44	22.91	23.79	57.33	2.65	10.68
6	ER2a	ExonRegion	0	94.94	86.30	195.04	85.16	241.66	22.10	84.65
7	E2a_E3a	KnownJunction	0	6.94	2.86	11.25	1.44	8.48	0.00	0.00
8	E2a_E4a	KnownJunction	0	122.32	63.84	248.09	77.18	485.17	14.23	101.72
9	I2	Intron	0	24.96	7.77	25.39	6.87	31.00	1.95	10.63
10	I2_AR1	ActiveIntronRegion	0	25.03	7.79	25.47	6.90	31.08	1.96	10.66
11	E3_Aa	NovelBoundary	1	38.57	10.53	38.66	9.13	39.44	2.17	10.61
12	ER3a	ExonRegion	0	3.62	0.84	5.85	0.40	24.12	0.00	0.00
13	E3_Da	NovelBoundary	1	45.88	8.59	37.87	10.05	66.92	1.66	12.96
14	I3	Intron	0	29.96	9.31	27.58	9.08	34.86	2.05	10.33
15	I3_AR1	ActiveIntronRegion	0	21.56	11.93	28.11	7.89	36.46	1.17	9.07
16	I3_AR2	ActiveIntronRegion	0	24.47	3.80	22.40	4.18	41.38	0.00	9.41
17	I3_SR1	SilentIntronRegion	0	34.40	9.71	28.20	10.27	35.43	2.96	11.45
18	I3_AR3	ActiveIntronRegion	0	29.44	8.77	27.63	8.86	33.76	1.72	9.96
19	E4_Aa	NovelBoundary	1	29.14	7.51	29.80	9.40	51.04	4.15	5.17
20	ER4a	ExonRegion	0	184.26	84.88	333.50	101.53	495.91	18.12	121.47
21	E4a_E5a	KnownJunction	0	277.07	111.29	412.83	106.17	609.56	25.65	140.26
22	ER5a	ExonRegion	0	264.46	118.64	446.09	124.90	776.97	29.51	182.76
23	E5a_E6a	KnownJunction	0	254.96	125.66	448.70	116.33	745.11	28.89	229.20
24	ER6a	ExonRegion	0	248.05	125.85	356.39	121.38	620.32	22.12	214.66
25	E6a_E7a	KnownJunction	0	121.95	109.87	183.83	105.60	439.71	19.97	141.92
26	ER7a	ExonRegion	0	138.21	99.99	218.78	101.51	609.17	21.43	173.80
27	E7a_E8a	KnownJunction	0	103.64	79.16	150.96	86.23	395.06	19.27	107.23
28	ER8a	ExonRegion	0	117.82	98.93	180.80	108.60	433.27	19.18	122.72
29	E8a_E9a	KnownJunction	0	115.03	95.00	212.62	93.11	619.38	23.07	143.90
30	ER9a	ExonRegion	0	124.13	100.67	237.50	105.57	560.11	28.09	148.87
31	E9a_E10a	KnownJunction	0	141.18	104.51	245.23	119.34	402.00	33.12	134.24
32	ER10a	ExonRegion	0	153.20	109.98	228.46	121.29	460.49	28.33	126.93
33	E10a_E11a	KnownJunction	0	147.04	91.11	223.49	103.98	526.09	25.19	116.57
34	E11_Aa	NovelBoundary	1	57.38	0.00	92.75	0.00	0.00	0.00	0.00
35	ER11a	ExonRegion	0	128.41	79.41	241.44	99.18	502.06	22.28	126.63
36	E11a_E12a	KnownJunction	0	116.43	75.35	223.13	103.03	539.57	22.73	118.42
37	ER12a	ExonRegion	0	93.34	50.09	192.53	52.20	308.86	12.38	74.99