Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CDK3	Gene	0	19.18	11.90	12.77	10.28	19.16	14.17	7.45
2	293215	Transcript	0	22.26	13.71	16.01	13.68	25.76	17.59	10.38
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	0.00	0.94	0.00	0.00	0.00	0.00	0.00
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER4a	ExonRegion	0	7.92	5.47	5.83	3.84	8.61	5.51	3.11
10	E4_Da	NovelBoundary	0	22.33	16.10	8.00	10.10	6.13	12.25	12.45
11	E4a_E5a	KnownJunction	0	16.99	12.85	16.27	12.76	21.53	10.69	8.21
12	I4	Intron	0	18.70	10.27	12.10	5.97	14.45	6.70	7.84
13	I4_AR1	ActiveIntronRegion	0	18.80	10.33	12.17	5.99	14.53	6.74	7.89
14	E5_Aa	NovelBoundary	0	20.38	22.44	12.07	7.91	16.69	12.89	7.31
15	ER5a	ExonRegion	0	30.03	21.63	24.14	17.39	38.20	22.40	13.81
16	E5_Da	NovelBoundary	0	3.05	9.59	1.42	2.65	0.00	4.23	0.60
17	E5a_E6a	KnownJunction	0	40.41	27.43	23.51	21.81	41.86	23.56	20.34
18	E6_Aa	NovelBoundary	1	3.52	12.85	3.12	4.82	0.92	0.00	2.95
19	ER6a	ExonRegion	0	37.03	26.10	25.06	21.47	47.59	21.71	22.79
20	E6_Da	NovelBoundary	0	10.01	19.81	2.92	5.20	0.88	4.18	1.55
21	E6a_E7a	KnownJunction	0	19.29	15.74	16.01	16.74	44.79	20.15	13.86
22	E7_Aa	NovelBoundary	1	12.02	15.66	2.24	4.01	2.07	2.76	1.73
23	ER7a	ExonRegion	0	39.14	25.25	26.35	19.75	42.74	28.66	16.38
24	E7_Da	NovelBoundary	1	10.71	2.73	1.90	1.27	1.18	1.66	2.01
25	E7a_E8a	KnownJunction	0	36.62	18.50	26.46	15.33	36.82	23.91	12.08
26	E8_Aa	NovelBoundary	0	9.08	1.50	10.62	4.44	0.95	9.03	2.24
27	ER8a	ExonRegion	0	38.41	27.93	25.55	24.63	45.05	37.40	13.26
28	E8_Da	NovelBoundary	1	22.20	1.37	4.80	7.23	3.27	4.31	6.78
29	E8a_E9a	KnownJunction	0	33.63	19.20	27.63	30.94	30.80	28.33	17.80
30	I8	Intron	0	18.87	4.99	10.34	1.50	3.81	6.19	2.93
31	I8_AR1	ActiveIntronRegion	0	10.36	2.43	5.54	0.83	1.09	4.87	1.35
32	I8_AR2	ActiveIntronRegion	0	23.95	6.50	13.20	1.90	5.41	7.00	3.86
33	E9_Aa	NovelBoundary	1	23.83	9.80	20.87	2.63	2.17	2.57	3.28
34	ER9a	ExonRegion	0	53.07	25.70	35.44	26.53	47.43	44.36	19.26
35	E9a_E10a	KnownJunction	1	36.68	13.69	31.23	30.02	54.70	43.66	24.66
36	ER10a	ExonRegion	0	33.72	20.11	20.74	18.72	29.34	23.78	11.70