Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WIPI1	Gene	0	333.94	378.77	92.29	118.10	57.95	447.89	456.13
2	262139	Transcript	0	434.31	483.98	119.86	149.42	72.07	553.04	588.84
3	ER1a	ExonRegion	0	17.72	92.81	4.44	25.38	5.04	103.34	39.02
4	E1a_E2a	KnownJunction	1	35.67	130.75	6.22	35.14	8.58	127.57	79.10
5	E1a_E3a	NovelJunction	1	1.25	12.16	1.84	2.57	3.07	22.11	19.03
6	ER2a	ExonRegion	0	158.15	264.50	52.76	74.64	24.92	293.19	239.01
7	E2a_E3a	KnownJunction	0	279.11	367.06	114.42	116.25	58.78	451.15	416.33
8	ER3a	ExonRegion	0	439.85	557.72	142.76	176.82	59.67	799.91	575.94
9	E3_Da	NovelBoundary	1	12.50	24.14	3.35	4.88	3.14	123.14	0.82
10	E3a_E4a	KnownJunction	0	496.74	521.54	165.96	163.52	68.97	731.63	675.98
11	ER4a	ExonRegion	0	635.31	586.78	201.82	194.15	79.28	853.38	802.06
12	E4a_E5a	KnownJunction	0	519.09	586.30	163.86	198.42	83.47	777.70	680.77
13	ER5a	ExonRegion	0	527.45	619.06	154.78	187.38	103.16	693.89	685.85
14	E5a_E6a	KnownJunction	0	614.67	684.37	185.48	198.31	105.93	690.44	768.62
15	ER6a	ExonRegion	0	492.91	668.68	151.30	184.35	95.81	675.41	807.96
16	E6a_E7a	KnownJunction	0	433.94	528.11	127.94	128.28	89.91	527.63	720.84
17	E6a_E8a	NovelJunction	1	94.78	130.31	32.32	60.09	5.14	201.88	5.57
18	ER7a	ExonRegion	0	471.70	554.23	139.34	127.16	91.98	504.42	802.21
19	E7a_E8a	KnownJunction	0	508.41	567.78	146.82	132.39	89.08	489.93	879.82
20	ER8a	ExonRegion	0	427.71	644.79	130.60	158.47	98.98	627.22	759.20
21	E8a_E9a	KnownJunction	0	445.20	570.09	116.93	169.43	87.16	614.12	684.44
22	E8a_E10a	NovelJunction	0	2.29	11.85	0.56	4.28	1.18	12.38	0.00
23	E8a_E11a	NovelJunction	1	0.85	29.53	0.00	7.31	1.18	11.04	2.31
24	ER9a	ExonRegion	0	519.91	583.30	137.36	170.13	95.72	670.19	724.77
25	E9a_E10a	KnownJunction	0	613.07	530.18	135.34	179.51	92.81	692.16	680.01
26	I9_AR1	ActiveIntronRegion	1	23.02	14.78	9.32	6.61	7.44	113.37	2.74
27	ER10a	ExonRegion	0	672.29	579.33	165.37	197.26	96.00	722.70	780.64
28	E10_Da	NovelBoundary	1	42.79	43.37	16.40	12.33	11.99	174.31	10.13
29	E10a_E11a	KnownJunction	0	667.26	535.15	139.44	192.81	64.69	582.25	704.88
30	ER11a	ExonRegion	0	678.38	544.25	141.39	192.61	115.01	606.31	709.60
31	E11a_E12a	KnownJunction	0	488.50	430.38	100.81	156.21	61.18	494.43	494.45
32	E12_Aa	NovelBoundary	1	138.28	4.57	28.25	0.00	2.88	18.41	0.72
33	ER12a	ExonRegion	0	342.47	438.24	80.31	174.34	56.83	503.84	413.69
34	E12_Da	NovelBoundary	0	78.14	42.11	27.09	14.47	13.97	56.76	37.59
35	E12a_E13a	KnownJunction	0	300.47	441.57	72.93	172.60	52.42	492.10	477.97
36	I12	Intron	1	50.83	42.54	19.91	14.13	9.54	55.11	23.44
37	I12_AR1	ActiveIntronRegion	1	68.31	58.90	26.24	21.10	13.34	73.46	32.70
38	I12	Intron	1	53.46	34.91	19.41	12.19	10.10	49.31	21.65
39	I12_AR1	ActiveIntronRegion	1	53.49	34.93	19.42	12.19	10.11	49.34	21.66
40	E13_Aa	NovelBoundary	0	40.16	47.81	26.28	17.64	10.60	56.12	27.19
41	ER13a	ExonRegion	0	71.79	72.62	18.18	29.92	16.42	101.08	117.82