Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MBTD1	Gene	0	100.43	36.96	92.00	36.09	225.05	31.01	26.27
2	405860	Transcript	0	4.41	0.49	2.24	0.04	17.20	1.10	0.00
3	393180	Transcript	0	2.85	3.40	2.61	2.89	8.54	0.77	3.26
4	376381	Transcript	0	3.34	1.63	4.80	4.42	0.00	0.00	0.57
5	389496	Transcript	0	0.00	0.00	0.15	0.00	0.00	0.00	0.00
6	262063	Transcript	0	5.47	1.47	1.26	0.00	23.70	7.77	0.00
7	IG4	Intergenic	0	12.40	20.81	26.90	24.59	6.22	12.26	7.40
8	IG4_SR4	SilentIntergenicRegion	0	4.39	15.55	18.82	21.89	5.09	13.13	6.99
9	IG4_AR3	ActiveIntergenicRegion	0	8.03	24.30	24.91	26.05	4.59	14.71	9.74
10	IG4_SR3	SilentIntergenicRegion	0	13.58	27.25	35.18	29.33	8.46	13.87	9.27
11	IG4_AR2	ActiveIntergenicRegion	0	23.44	41.71	49.79	44.89	12.01	24.32	15.52
12	IG4_SR2	SilentIntergenicRegion	0	25.37	31.59	41.09	42.90	8.56	18.75	10.32
13	IG4_AR1	ActiveIntergenicRegion	0	13.88	11.36	16.83	6.42	3.91	6.82	3.13
14	ER1a	ExonRegion	0	4.41	0.49	2.24	0.04	17.20	1.10	0.00
15	E1_Ac	KnownBoundary	0	9.90	1.47	4.83	1.22	30.15	3.06	0.00
16	ER1b	ExonRegion	0	8.12	1.21	4.35	1.25	26.78	2.45	0.00
17	ER1c	ExonRegion	0	6.93	0.76	5.43	1.97	22.09	2.57	0.98
18	E1a_E2a	KnownJunction	0	17.14	2.68	6.91	7.02	48.76	1.66	3.31
19	E1a_E3a	KnownJunction	0	5.47	1.47	1.26	0.00	23.70	7.77	0.00
20	ER2a	ExonRegion	0	23.46	7.23	25.17	12.59	69.77	6.99	6.00
21	E2a_E3a	KnownJunction	0	33.80	11.80	37.74	14.30	74.53	12.84	9.07
22	I2_AR1	ActiveIntronRegion	1	10.37	7.29	22.55	9.80	7.00	1.23	3.66
23	I2_AR2	ActiveIntronRegion	0	9.66	7.12	19.16	7.84	7.12	1.23	3.37
24	ER3a	ExonRegion	0	118.26	44.82	94.90	43.74	204.25	32.05	21.97
25	E3a_E4a	KnownJunction	1	199.38	64.86	137.68	59.14	368.04	30.47	24.12
26	ER4a	ExonRegion	1	218.10	69.49	143.01	60.62	347.98	35.26	25.47
27	E4_Da	NovelBoundary	0	35.95	7.41	30.08	7.48	28.68	1.21	5.98
28	E4a_E5a	KnownJunction	0	161.91	58.22	116.47	52.56	201.34	28.33	22.87
29	ER5a	ExonRegion	0	112.53	50.18	101.61	36.13	256.86	32.59	23.77
30	E5a_E6a	KnownJunction	0	98.37	43.95	93.77	38.09	188.39	25.11	20.16
31	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER5b	ExonRegion	0	0.00	0.00	0.30	0.00	0.00	0.00	0.00
33	ER6a	ExonRegion	0	84.90	41.67	97.12	25.19	184.73	21.12	23.73
34	E6a_E7a	KnownJunction	1	54.11	29.63	66.03	11.46	136.45	17.18	13.66
35	I6_AR3	ActiveIntronRegion	0	10.41	7.10	15.14	5.22	6.71	9.75	4.14
36	ER7a	ExonRegion	0	89.57	41.95	97.53	30.25	177.10	19.75	24.54
37	E7a_E8a	KnownJunction	0	93.83	29.14	106.94	34.32	158.35	22.62	18.37
38	ER8a	ExonRegion	0	97.47	30.95	110.55	39.15	192.19	17.06	21.86
39	E8a_E9a	KnownJunction	0	79.79	20.44	94.20	36.57	178.89	15.06	24.72
40	ER9a	ExonRegion	0	75.90	27.66	97.72	39.36	198.39	22.43	25.80
41	E9a_E10a	KnownJunction	0	61.40	27.53	82.83	34.05	189.54	30.87	18.47
42	ER10a	ExonRegion	0	79.78	38.07	92.65	37.50	215.37	26.90	31.06
43	E10_Da	NovelBoundary	1	6.49	3.05	11.71	0.00	6.20	0.00	13.63
44	E10a_E11a	KnownJunction	1	48.85	23.78	71.56	24.63	316.91	11.68	28.89
45	E10a_E12a	NovelJunction	1	29.22	6.94	29.56	14.47	2.03	4.85	0.79
46	I10	Intron	0	13.50	1.48	12.80	1.97	5.82	0.44	7.81
47	I10_SR1	SilentIntronRegion	0	13.53	1.48	12.84	1.98	5.83	0.44	7.84
48	E11_Aa	NovelBoundary	0	9.45	1.44	10.02	1.14	13.46	0.00	12.60
49	ER11a	ExonRegion	1	52.53	26.05	67.65	23.31	298.85	9.55	28.49
50	E11_Da	NovelBoundary	1	27.45	0.00	28.81	0.00	4.68	0.00	2.44
51	E11a_E12a	KnownJunction	0	50.34	20.60	63.90	26.31	281.34	12.44	26.56
52	ER12a	ExonRegion	0	128.34	34.36	104.92	44.11	313.66	25.93	34.47
53	E12a_E13a	KnownJunction	0	95.82	23.57	73.22	27.96	208.14	29.88	24.69
54	E12a_E14a	KnownJunction	0	3.34	1.63	4.80	4.42	0.00	0.00	0.57
55	E13_Aa	NovelBoundary	0	41.72	2.52	32.48	4.93	9.54	0.00	5.92
56	ER13a	ExonRegion	0	98.85	33.08	81.47	39.20	227.13	21.03	25.99
57	E13a_E14a	KnownJunction	1	70.35	19.86	64.91	25.30	179.10	7.48	20.47
58	E13a_E15a	NovelJunction	0	10.35	9.67	8.71	1.68	2.12	2.57	3.05
59	ER14a	ExonRegion	0	60.10	18.72	66.47	26.43	202.80	13.83	24.31
60	E14a_E15a	KnownJunction	0	48.80	17.39	56.02	21.97	157.04	11.18	12.71
61	ER15a	ExonRegion	0	70.57	26.80	69.85	29.83	186.63	21.39	27.33
62	E15_Da	KnownBoundary	0	8.68	10.69	12.13	6.29	20.63	4.42	7.78
63	E15a_E16a	KnownJunction	0	65.76	16.13	58.16	15.25	187.37	21.06	18.83
64	ER15b	ExonRegion	0	2.85	3.40	2.61	2.89	8.54	0.77	3.26
65	ER16a	ExonRegion	0	77.94	21.74	66.00	15.81	310.46	27.06	28.09
66	ER16b	ExonRegion	0	96.70	21.67	77.55	21.60	333.66	31.21	32.77
67	E16_Db	NovelBoundary	0	32.75	7.72	22.72	5.96	24.97	3.11	9.20
68	E16b_E17a	KnownJunction	0	86.90	15.82	66.15	23.43	172.80	24.82	28.42
69	I16	Intron	0	21.82	7.45	17.96	6.87	13.96	4.47	10.53
70	I16_AR2	ActiveIntronRegion	0	27.33	10.67	21.40	11.03	18.00	3.80	13.03
71	I16_AR3	ActiveIntronRegion	0	27.30	9.94	22.66	6.56	17.30	5.14	13.07
72	I16_AR4	ActiveIntronRegion	0	30.49	8.51	26.38	9.60	20.15	6.42	15.75
73	I16_AR6	ActiveIntronRegion	1	21.12	8.55	19.35	6.31	13.05	5.08	15.14
74	I16_SR5	SilentIntronRegion	1	12.93	5.04	10.42	7.47	6.15	3.95	9.51
75	I16_SR6	SilentIntronRegion	1	7.94	4.54	9.38	7.57	6.93	1.70	8.31
76	ER17a	ExonRegion	1	31.19	14.67	24.13	21.64	81.69	9.05	16.96
77	E17_Da	KnownBoundary	1	20.78	6.75	14.84	19.13	54.22	1.66	7.08
78	ER17b	ExonRegion	0	112.93	41.35	102.74	39.70	248.77	38.58	29.16