Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 FMNL1 Gene 0 4.67 14.61 4.12 10.14 18.17 40.24 20.78 2 331495 Transcript 0 0.00 2.29 0.18 0.00 0.29 4.09 0.58 3 328118 Transcript 0 4.56 14.34 7.30 9.92 27.43 46.95 19.28 4 393507 Transcript 0 0.80 0.73 0.55 0.36 0.00 1.86 0.20 5 IG29_AR5 ActiveIntergenicRegion 0 0.87 1.11 0.17 1.91 1.12 31.37 3.43 6 IG29_AR6 ActiveIntergenicRegion 0 0.46 0.00 0.20 0.00 0.80 8.07 1.18 7 ER1a ExonRegion 0 0.00 0.76 0.00 0.00 0.00 4.74 0.26 8 E1_Ab KnownBoundary 0 0.00 1.39 0.00 1.46 0.00 14.36 2.88 9 ER1b ExonRegion 1 0.01 3.53 0.04 0.00 0.68 10.47 4.39 10 E1_Da KnownBoundary 1 0.97 2.23 0.00 0.00 1.18 23.91 5.89 11 E1a_E10b KnownJunction 0 2.40 0.00 1.03 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 1 2.67 12.59 0.08 0.00 6.56 23.67 8.74 13 E1b_E2a KnownJunction 1 4.64 18.55 0.56 0.00 4.47 32.35 15.36 14 ER2a ExonRegion 1 4.56 20.65 0.35 1.72 7.62 35.10 15.13 15 E2a_E3a KnownJunction 1 2.07 25.17 0.00 1.68 8.76 43.63 15.95 16 ER3a ExonRegion 1 4.63 23.71 0.83 0.39 6.08 43.35 20.21 17 E3a_E4a KnownJunction 1 5.76 16.63 1.32 0.00 9.06 35.24 15.85 18 ER4a ExonRegion 1 4.61 16.83 2.24 0.00 15.82 49.12 22.47 19 E4a_E5a KnownJunction 1 4.56 18.84 1.55 0.00 15.91 62.47 33.97 20 ER5a ExonRegion 1 4.61 16.92 0.74 0.00 10.87 55.01 32.84 21 E5_Da NovelBoundary 1 0.00 2.84 0.89 0.00 0.00 19.38 0.00 22 E5a_E6a KnownJunction 1 3.61 11.03 0.89 0.00 11.62 38.16 21.00 23 I5 Intron 0 0.51 1.89 0.25 1.11 0.24 9.56 0.45 24 I5_AR1 ActiveIntronRegion 0 0.52 1.90 0.25 1.12 0.24 9.61 0.46 25 ER6a ExonRegion 1 6.20 18.47 1.35 1.47 15.53 57.87 33.24 26 E6a_E7a KnownJunction 1 3.19 7.80 0.00 0.00 15.77 36.74 16.84 27 E6a_E8a NovelJunction 1 0.00 0.00 0.00 0.00 0.00 12.97 0.00 28 ER7a ExonRegion 1 5.19 14.71 1.27 1.74 17.40 33.45 21.83 29 E7a_E8a KnownJunction 1 11.25 14.90 1.61 0.00 20.72 37.57 38.45 30 ER8a ExonRegion 1 7.33 15.64 1.33 0.00 17.64 35.06 36.05 31 E8a_E9a KnownJunction 1 5.97 14.00 1.47 0.00 13.72 24.12 25.55 32 ER9a ExonRegion 1 6.51 18.30 1.62 1.39 15.99 35.31 27.42 33 E9a_E10a KnownJunction 1 8.78 25.25 1.38 3.96 21.07 47.11 38.12 34 E10_Ab NovelBoundary 1 8.31 18.28 3.16 3.58 21.02 33.12 30.08 35 ER10a ExonRegion 1 11.19 28.17 3.18 4.21 26.52 39.69 37.27 36 ER10b ExonRegion 1 11.41 28.83 4.05 5.20 27.45 48.71 36.71 37 E10a_E11a KnownJunction 1 8.75 26.90 0.69 6.85 18.88 60.78 35.96 38 E11_Aa NovelBoundary 0 3.05 5.44 2.10 0.00 9.29 1.29 9.62 39 ER11a ExonRegion 1 10.72 28.48 1.72 7.35 22.17 58.31 42.61 40 E11_Da NovelBoundary 0 4.11 3.18 1.98 0.00 6.11 0.00 8.71 41 E11a_E12a KnownJunction 1 6.71 28.40 3.15 6.07 19.78 61.75 38.78 42 ER12a ExonRegion 1 9.75 20.09 1.68 6.35 18.90 59.89 36.06 43 E12a_E13a KnownJunction 1 8.81 15.29 0.00 6.58 9.08 68.26 27.16 44 E13_Aa NovelBoundary 0 0.82 8.70 1.39 8.45 2.14 3.83 3.27 45 ER13a ExonRegion 1 3.96 15.01 0.74 5.79 10.58 52.02 24.85 46 E13a_E14a KnownJunction 1 1.52 7.72 3.16 3.09 8.71 33.55 22.44 47 ER14a ExonRegion 0 3.33 8.61 2.22 4.48 4.56 30.97 11.59 48 E14a_E15a KnownJunction 1 2.62 0.97 0.00 1.44 0.88 15.28 2.95 49 ER15a ExonRegion 0 1.35 1.66 0.74 2.13 0.20 13.43 2.68 50 E15_Da KnownBoundary 0 0.88 2.65 0.75 2.82 0.00 15.79 1.43 51 E15a_E15b KnownJunction 0 0.00 2.18 0.60 1.08 0.00 5.57 0.60 52 ER15b ExonRegion 0 0.00 0.70 0.08 1.19 0.80 2.93 0.57 53 E15_Ab KnownBoundary 0 0.00 1.02 0.00 1.30 1.08 0.00 1.29 54 ER15c ExonRegion 0 0.90 4.44 2.74 3.71 10.76 10.28 7.97 55 E15b_E16a KnownJunction 0 2.77 7.62 6.70 11.13 12.73 18.36 20.75 56 ER16a ExonRegion 0 2.44 7.17 4.56 15.62 11.63 30.01 18.27 57 E16a_E17a KnownJunction 0 3.87 8.14 5.30 15.41 17.89 42.32 20.69 58 ER17a ExonRegion 0 5.23 13.80 9.07 18.66 27.56 54.41 27.49 59 E17a_E18a KnownJunction 0 9.93 10.46 9.02 21.70 26.10 51.38 31.00 60 ER18a ExonRegion 0 5.54 11.78 11.91 25.61 37.93 52.23 29.62 61 E18a_E19a KnownJunction 0 9.48 14.16 19.07 21.08 48.92 54.48 32.78 62 ER19a ExonRegion 0 5.07 23.14 15.09 25.17 49.93 48.12 32.84 63 E19a_E20a KnownJunction 0 1.65 26.56 7.80 29.20 43.09 38.27 26.67 64 ER20a ExonRegion 0 5.92 24.76 6.47 33.53 37.65 48.39 26.64 65 E20a_E21a KnownJunction 0 4.29 24.09 10.99 24.46 39.58 71.53 32.37 66 ER21a ExonRegion 0 7.79 27.56 9.61 33.50 53.94 70.16 39.16 67 E21a_E22a KnownJunction 0 8.29 26.82 10.30 27.06 46.94 77.99 38.92 68 ER22a ExonRegion 0 8.06 25.16 12.11 29.59 41.97 72.55 40.36 69 E22a_E24a KnownJunction 0 12.98 16.08 14.53 20.26 30.11 44.49 37.32 70 E22a_E25a NovelJunction 1 0.00 1.55 1.70 8.18 1.89 14.90 1.71 71 ER23a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER24a ExonRegion 0 9.05 16.97 9.19 17.73 39.58 47.85 24.59 73 E24a_E25a KnownJunction 0 4.89 18.47 8.45 13.22 37.23 48.94 15.69 74 ER25a ExonRegion 0 5.19 15.11 11.90 21.00 21.75 56.20 17.98 75 E25a_E26a KnownJunction 0 5.74 10.85 5.68 13.57 11.48 43.87 15.22 76 E26_Aa NovelBoundary 1 2.24 4.57 0.00 0.00 2.17 20.56 1.22 77 ER26a ExonRegion 0 6.15 14.86 5.05 13.28 21.58 46.85 14.33 78 E26a_E27a KnownJunction 0 0.00 1.44 0.00 0.00 0.00 4.37 0.00 79 E26a_E28a KnownJunction 0 4.56 14.34 7.30 9.92 27.43 46.95 19.28 80 ER27a ExonRegion 0 0.00 2.26 0.54 0.00 0.88 3.53 0.84 81 E27a_E28a KnownJunction 0 0.00 3.15 0.00 0.00 0.00 4.37 0.89 82 ER28a ExonRegion 0 3.04 16.22 2.47 9.75 13.25 39.89 12.11