Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIAA1267	Gene	0	170.82	147.67	230.84	446.61	185.38	140.66	63.26
2	393476	Transcript	0	0.60	0.26	1.48	0.89	3.46	0.09	0.10
3	262419	Transcript	0	190.11	169.61	266.13	539.19	185.54	157.43	87.29
4	IG46	Intergenic	0	3.07	4.37	3.20	10.19	5.01	3.55	0.81
5	IG46_AR1	ActiveIntergenicRegion	0	16.55	19.19	18.21	47.67	33.43	17.11	4.30
6	ER1a	ExonRegion	0	6.87	5.39	7.41	40.86	4.71	9.03	2.93
7	E1a_E2a	KnownJunction	1	4.01	3.49	4.77	44.32	2.95	20.93	6.94
8	ER2a	ExonRegion	0	157.64	178.35	270.39	498.02	270.73	130.75	56.97
9	E2a_E3a	KnownJunction	0	196.94	200.42	312.63	581.21	276.45	125.42	50.12
10	I2_AR7	ActiveIntronRegion	0	19.00	3.36	21.04	8.33	65.68	1.15	6.78
11	I2_SR7	SilentIntronRegion	0	19.44	3.23	19.20	6.11	38.88	0.48	8.94
12	I2_AR11	ActiveIntronRegion	0	8.40	2.95	9.66	3.07	40.55	1.70	4.10
13	I2_AR12	ActiveIntronRegion	0	3.44	6.07	9.31	0.05	41.87	0.00	3.77
14	I2_AR14	ActiveIntronRegion	0	10.09	1.35	12.80	4.50	37.16	0.75	2.85
15	I2_SR13	SilentIntronRegion	0	11.01	2.24	11.70	3.59	45.87	0.64	3.77
16	I2_AR17	ActiveIntronRegion	0	12.47	2.47	14.70	8.20	47.24	0.76	4.59
17	ER3a	ExonRegion	0	230.67	203.58	352.90	618.46	279.77	152.70	77.15
18	E3a_E5a	KnownJunction	0	198.06	176.99	349.83	519.99	200.14	168.54	66.45
19	E3a_E6a	NovelJunction	1	45.66	53.25	75.59	134.13	11.00	41.46	4.77
20	ER3b	ExonRegion	0	1.21	0.52	2.71	1.78	6.48	0.18	0.19
21	ER4a	ExonRegion	0	0.00	0.00	0.25	0.00	0.44	0.00	0.00
22	ER5a	ExonRegion	0	246.34	177.81	384.20	570.08	222.30	172.20	88.76
23	E5a_E6a	KnownJunction	0	258.39	176.89	393.11	656.20	248.44	167.50	99.42
24	ER6a	ExonRegion	0	244.53	229.22	422.84	719.47	264.13	203.19	112.10
25	E6a_E7a	KnownJunction	0	269.26	268.63	433.06	767.68	272.92	218.04	148.62
26	ER7a	ExonRegion	0	226.41	241.86	366.03	776.25	264.26	208.15	130.73
27	E7a_E8a	KnownJunction	0	255.97	208.10	413.10	777.79	374.63	231.31	138.96
28	ER8a	ExonRegion	0	329.97	230.85	471.95	781.48	300.79	211.32	125.73
29	E8a_E9a	KnownJunction	0	234.98	177.36	387.37	649.94	220.29	150.80	96.21
30	ER9a	ExonRegion	0	265.09	194.70	370.25	611.80	270.18	165.02	97.65
31	E9a_E10a	KnownJunction	0	155.82	155.53	211.63	438.66	222.11	95.06	76.23
32	E9a_E11a	NovelJunction	0	31.93	44.08	69.64	171.35	53.39	52.18	24.28
33	I9_AR2	ActiveIntronRegion	1	35.73	9.72	27.55	8.73	12.96	1.23	0.34
34	I9_AR3	ActiveIntronRegion	1	35.84	9.28	27.53	11.90	11.78	0.33	0.00
35	ER10a	ExonRegion	0	189.15	181.07	205.23	473.85	137.18	113.28	89.58
36	E10a_E11a	KnownJunction	0	229.55	211.59	257.27	639.08	156.28	161.15	121.53
37	ER11a	ExonRegion	0	166.79	168.90	198.04	568.68	205.26	174.85	91.85
38	E11a_E12a	KnownJunction	0	94.28	146.28	161.82	374.18	76.88	147.16	49.57
39	I11_AR4	ActiveIntronRegion	0	36.51	8.20	25.79	11.63	21.31	2.74	5.71
40	ER12a	ExonRegion	0	140.78	160.00	191.99	530.31	186.68	175.86	84.57
41	E12a_E13a	KnownJunction	0	159.96	135.06	168.05	508.83	143.20	153.48	86.03
42	ER13a	ExonRegion	0	171.41	155.52	200.82	506.78	114.93	155.66	76.23
43	E13a_E14a	KnownJunction	0	135.09	156.29	165.13	446.33	126.65	137.70	58.11
44	ER14a	ExonRegion	0	122.77	102.83	137.75	360.38	103.60	110.99	56.95
45	E14a_E15a	KnownJunction	0	136.12	99.33	126.96	278.79	89.72	106.48	71.14
46	E15_Aa	NovelBoundary	0	91.08	22.51	86.19	43.59	50.97	14.82	16.37
47	ER15a	ExonRegion	0	78.24	92.34	81.03	264.65	70.86	86.48	37.21
48	E15a_E16a	KnownJunction	0	63.69	98.78	87.30	336.93	38.96	102.70	35.53
49	ER16a	ExonRegion	0	189.88	124.77	202.29	382.52	142.54	161.46	55.70