Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATP6V0A1	Gene	0	110.50	231.35	236.68	1231.78	180.36	313.90	202.16
2	393829	Transcript	0	4.19	7.90	9.74	53.67	10.87	14.79	13.63
3	343619	Transcript	0	0	0	0	0	0	0	0
4	264649	Transcript	0	22.36	55.37	69.23	266.43	38.74	64.08	38.33
5	ER1a	ExonRegion	0	3.30	11.11	6.11	56.05	6.38	8.50	4.58
6	E1a_E2a	KnownJunction	0	19.36	31.08	21.86	120.07	26.35	31.25	16.45
7	ER2a	ExonRegion	0	74.29	132.23	159.30	597.77	46.93	171.88	83.37
8	E2a_E3a	KnownJunction	0	175.08	226.20	362.81	1026.32	142.93	361.96	162.65
9	ER3a	ExonRegion	0	123.29	286.28	313.05	1225.53	128.22	419.94	144.67
10	E3a_E4a	KnownJunction	1	122.37	270.94	298.87	1146.85	68.97	426.38	103.29
11	E3a_E5a	NovelJunction	0	0.95	10.59	3.74	14.63	0.00	14.15	0.89
12	ER4a	ExonRegion	1	132.93	286.94	342.97	1270.30	97.69	429.60	133.29
13	E4a_E5a	KnownJunction	0	86.22	164.88	267.85	818.53	71.65	214.48	120.37
14	E4a_E6a	NovelJunction	1	1.03	1.52	11.58	39.26	0.00	2.63	0.00
15	E4a_E6b	NovelJunction	1	4.84	1.63	5.83	40.93	1.18	4.96	0.85
16	ER5a	ExonRegion	1	122.47	193.04	287.15	827.94	117.38	221.62	125.74
17	E5a_E6a	KnownJunction	0	20.09	50.10	60.04	244.31	37.09	58.61	34.90
18	E5a_E6b	KnownJunction	0	106.58	135.80	209.40	671.02	89.26	156.86	129.15
19	I5_SR1	SilentIntronRegion	0	28.73	11.37	38.99	12.20	2.98	6.44	5.07
20	I5_AR4	ActiveIntronRegion	0	29.85	13.99	51.72	16.65	5.63	7.72	9.41
21	E6_Ab	NovelBoundary	1	14.75	50.47	74.81	200.96	25.54	53.28	36.66
22	ER6a	ExonRegion	0	24.62	60.63	78.42	288.56	40.38	69.55	41.76
23	ER6b	ExonRegion	0	90.47	213.96	233.26	965.04	108.56	230.04	130.55
24	E6a_E7a	KnownJunction	0	72.03	214.01	198.64	846.08	80.04	215.85	89.57
25	ER7a	ExonRegion	0	75.67	209.28	184.95	898.10	100.52	220.40	124.23
26	E7a_E8a	KnownJunction	0	64.62	170.27	156.31	811.22	95.78	206.52	88.83
27	I7	Intron	1	23.92	14.57	55.15	28.64	4.64	15.65	8.09
28	I7_AR2	ActiveIntronRegion	1	28.62	16.61	62.24	34.03	4.84	18.39	9.87
29	ER8a	ExonRegion	0	59.39	195.07	172.15	857.73	103.50	246.63	105.62
30	E8a_E9a	KnownJunction	0	56.18	219.00	163.81	932.12	105.54	214.51	100.99
31	ER9a	ExonRegion	0	60.30	238.78	172.03	1033.67	113.51	218.87	116.23
32	E9a_E10a	KnownJunction	0	86.27	213.01	190.79	1023.42	161.69	198.35	128.88
33	ER10a	ExonRegion	0	161.80	339.70	312.90	1586.48	234.58	360.85	233.21
34	E10a_E11a	KnownJunction	0	229.64	428.70	415.88	2060.96	232.90	543.45	313.10
35	ER11a	ExonRegion	0	206.14	336.82	371.58	1567.65	309.65	362.77	238.81
36	E11a_E12a	KnownJunction	0	164.01	279.79	293.23	1346.18	277.83	279.17	196.53
37	ER12a	ExonRegion	0	182.15	286.55	334.64	1402.88	225.21	304.58	204.47
38	E12a_E13a	KnownJunction	0	148.96	257.57	285.84	1352.93	198.60	285.95	204.94
39	E12a_E14a	NovelJunction	1	11.18	8.01	25.26	63.34	3.34	31.57	12.10
40	ER13a	ExonRegion	0	139.80	258.49	276.48	1208.87	216.56	253.09	207.56
41	E13a_E14a	KnownJunction	0	154.35	270.86	333.25	1209.51	232.23	259.98	246.08
42	ER14a	ExonRegion	0	141.72	265.05	317.19	1306.36	207.33	282.80	260.10
43	E14a_E15a	KnownJunction	0	86.92	250.39	228.82	1204.44	173.68	293.06	184.65
44	ER15a	ExonRegion	0	124.46	254.71	314.48	1289.53	209.87	288.40	244.21
45	E15a_E16a	KnownJunction	0	163.33	223.83	357.00	1429.79	298.58	346.92	256.37
46	ER16a	ExonRegion	0	126.20	253.42	322.47	1365.88	236.35	329.01	230.28
47	E16a_E17a	KnownJunction	0	105.73	294.32	292.58	1452.33	239.15	334.46	235.45
48	ER17a	ExonRegion	0	111.62	297.16	289.64	1571.60	215.45	352.67	273.53
49	E17a_E18a	KnownJunction	0	82.65	231.27	261.71	1391.86	188.69	314.31	267.12
50	E17a_E20b	NovelJunction	1	0.62	25.35	2.86	48.98	10.77	7.53	0.00
51	ER18a	ExonRegion	0	96.75	215.21	229.92	1368.24	236.95	312.41	277.67
52	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	5.01	0.00	5.95	0.00
53	E18a_E20b	KnownJunction	0	90.34	158.63	220.18	1165.08	230.87	288.26	276.51
54	E18a_E22a	NovelJunction	1	0.00	0.00	1.41	13.71	2.05	10.34	0.80
55	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER19a	ExonRegion	0	0.00	0.00	0.00	0.19	0.00	0.28	0.00
57	I19_AR1	ActiveIntronRegion	1	12.49	10.29	48.10	16.79	6.23	7.50	16.77
58	ER20a	ExonRegion	0	16.78	31.59	38.95	209.49	43.46	52.92	54.53
59	ER20b	ExonRegion	0	74.37	222.95	187.51	1252.38	207.89	280.62	268.64
60	E20a_E21a	KnownJunction	0	73.02	205.57	118.04	1139.13	122.30	238.28	214.33
61	E20a_E22a	NovelJunction	1	9.41	27.80	37.85	231.63	34.00	50.44	38.62
62	ER21a	ExonRegion	0	74.01	230.70	168.94	1171.62	189.71	261.81	236.88
63	E21a_E22a	KnownJunction	0	54.94	187.47	133.54	981.46	204.66	235.03	174.14
64	ER22a	ExonRegion	0	108.54	222.66	213.58	1372.10	194.69	379.09	230.47