Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PDK2 Gene 0 23.76 11.04 22.62 17.45 85.54 6.84 76.19 2 7708 Transcript 0 31.94 13.75 28.85 22.01 115.74 10.85 93.49 3 IG30 Intergenic 0 3.17 1.57 6.52 8.05 0.05 0.22 174.13 4 IG30_SR1 SilentIntergenicRegion 0 4.86 2.34 9.87 15.58 0.00 0.13 249.01 5 IG30_AR1 ActiveIntergenicRegion 0 5.98 2.10 11.11 9.10 0.30 0.19 302.66 6 IG30_SR2 SilentIntergenicRegion 0 2.48 0.62 7.00 6.88 0.00 0.00 218.96 7 IG30_AR2 ActiveIntergenicRegion 0 3.57 1.49 6.76 5.38 0.11 0.76 170.96 8 IG30_AR6 ActiveIntergenicRegion 0 2.66 1.82 6.16 8.78 0.00 0.57 174.49 9 IG30_SR5 SilentIntergenicRegion 0 0.43 3.64 1.35 2.49 0.00 0.00 26.46 10 IG30_AR7 ActiveIntergenicRegion 0 0.51 2.08 0.76 1.18 0.00 0.00 15.82 11 ER1a ExonRegion 0 11.78 4.97 8.06 12.85 35.95 5.22 10.48 12 E1a_E2a KnownJunction 1 32.60 9.69 20.79 25.84 29.92 14.07 14.33 13 I1 Intron 1 0.04 0.94 0.72 0.48 0.18 0.12 20.69 14 I1_AR1 ActiveIntronRegion 1 0.00 0.25 1.13 0.78 0.33 0.00 18.03 15 I1_SR1 SilentIntronRegion 1 0.07 1.54 0.36 0.23 0.05 0.22 23.07 16 E2_Aa NovelBoundary 1 1.65 1.63 0.00 6.07 0.00 0.00 54.60 17 ER2a ExonRegion 0 28.76 16.88 30.42 36.89 123.09 16.58 77.07 18 E2a_E3a KnownJunction 0 31.26 23.80 33.51 24.76 158.58 18.20 85.34 19 I2_SR1 SilentIntronRegion 1 0.77 0.00 0.68 3.87 1.62 1.23 21.38 20 ER3a ExonRegion 0 40.58 20.20 43.48 25.77 137.39 15.53 119.88 21 E3a_E4a KnownJunction 0 46.51 15.84 43.33 26.44 105.72 10.32 129.89 22 ER4a ExonRegion 0 38.60 20.73 41.01 31.84 141.28 12.64 125.16 23 E4a_E5a KnownJunction 0 56.51 12.27 49.68 31.99 235.32 19.03 159.90 24 ER5a ExonRegion 0 31.10 13.58 30.57 27.67 152.34 11.02 128.09 25 E5a_E6a KnownJunction 0 37.89 15.63 28.31 29.50 130.04 20.61 113.49 26 ER6a ExonRegion 0 40.17 19.55 35.12 33.83 167.17 18.09 141.11 27 E6a_E7a KnownJunction 0 37.99 20.47 38.77 33.92 206.18 16.37 167.26 28 ER7a ExonRegion 0 44.27 16.19 39.96 25.36 149.13 9.66 141.44 29 E7a_E8a KnownJunction 0 41.47 10.88 34.72 13.76 98.14 2.92 106.43 30 ER8a ExonRegion 0 31.93 14.97 26.64 17.08 106.46 5.86 97.28 31 E8a_E9a KnownJunction 0 22.40 5.31 22.13 14.14 89.45 6.32 74.57 32 ER9a ExonRegion 0 28.18 9.09 26.07 9.32 114.42 5.12 76.96 33 E9a_E10a KnownJunction 0 18.16 7.46 14.86 11.35 79.62 6.35 45.70 34 I9 Intron 1 0.41 0.48 0.18 0.50 0.58 0.32 16.30 35 I9_SR1 SilentIntronRegion 1 0.43 0.48 0.19 0.52 0.61 0.34 16.86 36 ER10a ExonRegion 0 17.31 14.37 12.00 10.06 57.75 7.28 56.79 37 E10a_E11a KnownJunction 0 15.02 9.20 8.61 7.83 52.17 3.43 27.16 38 ER11a ExonRegion 0 18.25 7.61 17.74 11.95 60.40 3.23 64.86 39 IG31 Intergenic 0 2.77 0.00 0.60 2.56 5.86 0.00 28.00 40 IG31_AR1 ActiveIntergenicRegion 0 2.79 0.00 0.60 2.58 5.90 0.00 28.20