Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MYO19	Gene	0	45.35	46.37	85.77	74.38	135.68	27.92	168.47
2	378326	Transcript	0	45.07	39.37	87.97	63.09	114.12	19.85	177.75
3	268852	Transcript	0	42.53	30.25	76.72	48.56	90.24	14.49	140.02
4	IG8	Intergenic	0	2.51	5.90	4.13	2.05	14.33	2.00	3.25
5	IG8_AR1	ActiveIntergenicRegion	0	2.55	5.99	4.18	2.08	14.54	2.03	3.29
6	ER1a	ExonRegion	0	9.76	15.60	12.27	13.52	18.36	9.31	14.50
7	E1a_E2a	KnownJunction	0	29.66	26.85	50.35	38.82	29.14	10.64	76.23
8	ER2a	ExonRegion	0	36.16	45.17	78.61	76.25	65.19	25.88	118.24
9	E2a_E3a	KnownJunction	0	54.94	63.89	119.96	95.77	127.51	30.58	193.63
10	E3_Aa	NovelBoundary	1	23.93	1.31	50.57	0.00	4.06	1.66	6.66
11	ER3a	ExonRegion	0	51.64	66.67	118.07	109.47	175.60	47.44	212.14
12	E3a_E4a	KnownJunction	0	47.75	74.14	124.16	120.42	121.42	53.79	225.19
13	ER4a	ExonRegion	0	48.44	78.74	132.37	117.99	158.51	44.55	253.37
14	E4a_E5a	KnownJunction	0	47.82	63.52	135.68	102.49	156.09	67.96	254.23
15	E5_Aa	NovelBoundary	1	5.71	2.63	13.95	25.28	14.45	1.66	21.71
16	ER5a	ExonRegion	0	46.98	74.44	139.07	116.93	199.82	55.23	273.39
17	E5a_E6a	KnownJunction	0	45.81	62.16	114.83	105.82	184.72	52.93	234.91
18	E6_Aa	NovelBoundary	1	21.21	0.00	48.80	5.74	14.18	0.00	16.55
19	ER6a	ExonRegion	0	52.64	79.64	136.69	120.07	215.48	40.24	261.25
20	E6a_E7a	KnownJunction	0	44.78	69.49	118.93	109.42	211.81	43.82	233.87
21	ER7a	ExonRegion	0	54.26	77.67	133.85	105.86	185.20	37.34	268.30
22	E7_Da	NovelBoundary	1	13.27	5.78	12.26	7.75	26.93	1.66	61.42
23	E7a_E8a	KnownJunction	0	62.45	64.89	126.26	75.72	199.78	25.86	223.48
24	E7a_E9a	NovelJunction	1	0.00	10.40	7.04	24.11	2.01	13.45	13.24
25	I7	Intron	1	7.11	3.81	10.95	6.93	19.47	0.17	41.25
26	I7_AR1	ActiveIntronRegion	1	8.26	4.70	12.64	7.82	22.02	0.23	46.92
27	ER8a	ExonRegion	0	57.47	63.99	135.39	93.93	211.95	31.12	238.75
28	E8a_E9a	KnownJunction	0	51.00	62.18	141.17	84.47	233.89	32.94	234.63
29	ER9a	ExonRegion	0	52.22	69.61	138.83	95.24	188.14	38.08	256.18
30	E9a_E10a	KnownJunction	0	56.50	66.05	134.26	107.63	194.45	51.94	268.04
31	ER10a	ExonRegion	0	59.84	85.29	153.47	134.07	205.49	41.41	303.00
32	E10a_E11a	KnownJunction	0	78.76	90.29	159.97	130.88	203.90	42.32	260.03
33	ER11a	ExonRegion	0	63.50	89.52	145.07	119.13	214.96	37.91	313.07
34	E11_Da	NovelBoundary	0	22.66	13.92	24.00	18.75	47.40	11.28	33.99
35	E11a_E12a	KnownJunction	0	49.34	76.08	130.61	133.48	125.89	40.52	381.42
36	I11_AR1	ActiveIntronRegion	0	12.13	9.10	21.98	10.88	44.33	5.56	22.35
37	ER12a	ExonRegion	0	40.61	73.13	104.58	110.62	162.86	29.50	303.20
38	E12_Da	NovelBoundary	1	11.48	14.29	27.27	15.12	34.81	0.00	37.10
39	E12a_E13a	KnownJunction	1	41.88	51.41	73.35	58.73	135.04	12.86	195.01
40	E12a_E14a	NovelJunction	0	1.85	11.45	8.75	13.87	8.69	4.26	19.48
41	I12	Intron	0	6.29	7.45	13.06	12.97	28.36	2.28	20.15
42	I12_AR1	ActiveIntronRegion	0	6.32	7.49	13.14	13.04	28.53	2.30	20.28
43	ER13a	ExonRegion	0	50.25	61.85	94.88	86.15	174.69	21.75	284.05
44	E13a_E14a	KnownJunction	1	71.08	74.93	126.26	106.12	206.51	20.29	294.42
45	ER14a	ExonRegion	0	62.77	64.80	122.92	107.79	251.67	20.31	335.58
46	E14_Da	NovelBoundary	0	18.34	17.42	26.38	31.62	15.51	10.53	29.57
47	E14a_E15a	KnownJunction	0	56.41	53.80	130.34	80.51	259.57	24.09	352.07
48	I14_AR1	ActiveIntronRegion	0	10.96	7.99	15.50	16.43	10.98	5.40	14.05
49	I14_SR1	SilentIntronRegion	0	14.18	6.06	20.05	11.75	14.61	2.89	17.96
50	I14_AR2	ActiveIntronRegion	0	10.95	7.45	12.19	15.57	11.24	2.30	13.10
51	E15_Aa	NovelBoundary	0	11.03	8.33	12.76	23.43	9.59	5.20	20.06
52	ER15a	ExonRegion	0	88.28	73.33	189.24	120.77	264.05	36.12	412.58
53	E15_Da	KnownBoundary	0	84.77	65.63	197.94	115.08	220.80	35.35	384.00
54	E15a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER15b	ExonRegion	0	80.26	75.73	168.37	112.85	190.41	29.97	358.58
56	E15b_E16a	KnownJunction	0	78.51	78.21	133.39	90.32	165.13	30.77	298.24
57	ER16a	ExonRegion	0	80.21	75.14	178.45	121.06	246.13	41.69	367.06
58	E16a_E17a	KnownJunction	0	86.44	53.65	163.12	129.77	250.95	43.76	388.07
59	ER17a	ExonRegion	0	48.29	54.50	112.76	82.00	144.13	30.20	228.52
60	E17a_E18a	KnownJunction	0	59.98	45.98	120.28	73.90	106.53	17.18	223.23
61	ER18a	ExonRegion	0	47.98	47.08	103.38	83.06	116.52	20.45	197.12
62	E18a_E19a	KnownJunction	0	70.51	60.66	133.13	98.29	173.77	33.45	244.29
63	ER19a	ExonRegion	0	37.87	33.03	81.00	51.43	129.91	18.08	157.96
64	E19_Da	NovelBoundary	0	5.32	12.95	18.21	10.13	19.64	8.33	20.24
65	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER20a	ExonRegion	0	24.16	13.59	22.05	12.64	40.14	8.53	24.05
67	E20_Ab	KnownBoundary	0	42.38	28.45	64.71	58.76	57.31	17.77	142.41
68	ER20b	ExonRegion	0	38.41	29.37	69.79	47.54	116.17	15.92	132.45
69	E20a_E21a	KnownJunction	0	60.38	48.55	109.80	79.40	110.19	22.86	206.62
70	E20a_E23a	NovelJunction	0	0.75	7.70	2.66	7.59	4.47	2.44	4.13
71	ER21a	ExonRegion	0	79.70	58.54	155.75	96.05	214.14	25.39	298.90
72	E21a_E22a	KnownJunction	0	4.94	1.47	3.15	5.01	7.42	0.00	0.00
73	E21a_E23a	KnownJunction	0	85.07	60.50	153.43	97.12	180.48	28.97	280.04
74	ER22a	ExonRegion	0	4.16	4.79	8.13	10.70	8.57	2.22	1.42
75	E22a_E23a	KnownJunction	0	7.71	7.41	4.43	12.16	18.03	1.66	0.00
76	ER23a	ExonRegion	0	54.68	53.63	97.64	106.66	198.05	34.23	201.82
77	E23a_E24a	KnownJunction	0	64.24	42.98	100.35	74.47	244.38	31.01	198.17
78	ER24a	ExonRegion	0	41.63	40.55	59.13	78.70	170.89	25.83	156.66
79	E24_Da	NovelBoundary	1	5.66	12.61	4.51	6.53	39.37	0.00	27.26
80	E24a_E25a	KnownJunction	0	18.81	21.46	40.84	59.22	120.13	12.49	133.60
81	I24	Intron	0	14.80	9.95	18.22	11.40	46.78	5.59	24.77
82	I24_AR1	ActiveIntronRegion	0	14.82	9.97	18.25	11.42	46.88	5.60	24.82
83	E25_Aa	NovelBoundary	0	21.08	16.66	35.68	29.58	78.82	19.16	64.23
84	ER25a	ExonRegion	0	39.55	45.35	71.54	87.35	153.17	37.81	180.77
85	E25_Da	NovelBoundary	0	3.19	11.14	5.03	6.80	10.14	18.63	9.66
86	E25a_E26a	KnownJunction	0	57.86	46.21	105.31	69.27	168.47	37.60	197.42
87	E25a_E27a	NovelJunction	1	5.47	14.03	10.79	32.94	13.58	28.84	67.34
88	I25	Intron	0	8.88	13.48	10.43	8.61	11.88	11.03	11.30
89	I25_AR1	ActiveIntronRegion	0	8.94	13.58	10.51	8.67	11.97	11.11	11.39
90	E26_Aa	NovelBoundary	1	0.78	6.94	3.94	10.78	13.35	21.33	14.13
91	ER26a	ExonRegion	0	67.72	62.57	130.85	121.17	254.27	44.41	257.61
92	E26_Da	NovelBoundary	0	9.38	27.64	7.63	22.84	16.30	15.44	23.07
93	E26a_E27a	KnownJunction	0	82.53	50.15	192.22	122.86	283.32	35.99	353.96
94	I26_AR1	ActiveIntronRegion	0	4.73	10.64	6.31	5.90	6.92	13.90	8.45
95	ER27a	ExonRegion	0	78.97	65.66	124.80	126.61	211.41	51.99	235.46