Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TRPV1	Gene	0	14.22	7.05	6.39	4.92	16.50	3.80	18.03
2	174621	Transcript	0	1.55	0.74	0.00	0.38	0.82	0.00	1.02
3	399759	Transcript	0	0.70	1.10	0.32	0.00	1.11	0.00	2.72
4	344161	Transcript	0	0	0	0	0	0	0	0
5	399756	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.52
6	399752	Transcript	1	2.23	2.67	0.76	1.18	0.15	0.09	10.93
7	310522	Transcript	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
8	IG19_SR3	SilentIntergenicRegion	0	6.53	3.50	2.55	1.66	9.87	0.71	8.64
9	IG19_AR3	ActiveIntergenicRegion	0	6.62	3.31	0.52	0.46	3.79	0.47	8.41
10	IG19_SR2	SilentIntergenicRegion	0	6.16	2.60	1.05	0.85	3.40	0.00	10.46
11	IG19_AR1	ActiveIntergenicRegion	0	9.76	5.94	1.73	1.85	6.56	0.99	13.48
12	ER1a	ExonRegion	0	3.10	1.48	0.00	0.76	1.63	0.00	2.04
13	E1a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	I1	Intron	1	5.28	2.16	1.23	0.43	4.75	0.42	10.85
15	I1_SR1	SilentIntronRegion	1	5.30	2.01	1.14	0.53	4.31	0.26	9.87
16	I1_AR1	ActiveIntronRegion	1	5.28	2.71	1.55	0.07	6.29	0.95	14.27
17	E2_Aa	NovelBoundary	1	5.66	2.89	2.08	0.00	5.58	0.00	14.09
18	ER2a	ExonRegion	0	1.39	2.20	0.63	0.01	2.22	0.00	5.43
19	E2_Da	NovelBoundary	0	4.86	2.36	3.66	0.00	2.97	0.00	11.62
20	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	I2	Intron	1	4.21	1.63	0.72	0.34	2.72	0.33	7.56
22	I2_AR1	ActiveIntronRegion	1	3.56	2.64	1.66	0.68	2.35	0.00	9.16
23	I2_AR2	ActiveIntronRegion	1	5.01	1.90	0.73	0.34	2.99	0.45	7.81
24	I2_AR3	ActiveIntronRegion	1	0.85	0.91	0.50	0.93	1.82	0.46	10.27
25	E3_Aa	NovelBoundary	1	2.30	0.00	0.00	0.00	4.63	1.10	10.40
26	ER3a	ExonRegion	0	2.55	1.45	0.70	1.20	1.67	0.75	5.68
27	E3_Ab	KnownBoundary	0	2.44	1.21	0.75	4.39	1.13	0.00	5.32
28	ER3b	ExonRegion	0	8.23	6.63	4.71	4.53	9.34	3.67	18.31
29	E3a_E4a	KnownJunction	1	6.59	4.18	5.85	2.98	16.30	7.58	20.95
30	ER4a	ExonRegion	1	11.17	8.58	5.37	2.93	10.89	5.41	33.22
31	E4_Da	KnownBoundary	1	2.25	0.00	0.89	1.33	0.00	0.00	8.23
32	E4a_E4b	KnownJunction	1	7.24	8.64	4.84	2.63	9.43	6.19	22.86
33	ER4b	ExonRegion	1	2.23	2.67	0.76	1.18	0.15	0.09	10.93
34	E4_Ab	KnownBoundary	1	2.50	4.33	0.82	1.68	0.00	0.00	15.05
35	ER4c	ExonRegion	1	12.07	12.72	5.21	3.17	15.51	4.84	34.18
36	E4b_E5a	KnownJunction	0	14.09	7.07	2.77	2.71	17.52	1.15	21.76
37	ER5a	ExonRegion	0	11.54	9.97	4.25	3.61	13.19	3.20	23.19
38	E5a_E6a	KnownJunction	0	15.92	6.07	2.40	2.38	25.36	0.00	16.25
39	ER6a	ExonRegion	0	11.33	6.08	2.08	6.01	9.89	3.74	18.46
40	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E6a_E8a	KnownJunction	0	8.11	4.10	7.07	10.13	8.05	0.00	15.29
42	E6a_E9a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
43	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.67
44	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
45	ER8a	ExonRegion	1	5.75	5.28	6.56	5.18	11.16	0.52	18.44
46	E8a_E9a	KnownJunction	0	7.46	4.12	2.41	7.18	3.90	0.00	16.60
47	ER9a	ExonRegion	0	10.71	6.89	6.52	8.20	14.09	1.60	20.73
48	E9a_E10a	KnownJunction	0	12.37	2.76	6.21	10.89	12.79	4.85	19.76
49	ER10a	ExonRegion	0	17.05	5.08	7.04	5.34	18.55	5.44	22.05
50	E10a_E11a	KnownJunction	0	22.35	4.86	7.70	8.53	17.20	5.33	18.66
51	E11_Ab	NovelBoundary	1	7.86	2.31	7.27	5.23	10.37	2.47	17.51
52	ER11a	ExonRegion	0	18.57	4.25	8.92	6.51	15.79	3.81	20.28
53	ER11b	ExonRegion	0	15.37	6.07	7.45	5.61	13.77	3.68	21.70
54	ER11c	ExonRegion	0	13.43	5.40	8.00	4.86	16.94	4.55	21.34
55	E11_Db	NovelBoundary	0	6.63	3.15	1.67	0.00	14.18	0.00	4.83
56	E11c_E12a	KnownJunction	0	12.28	5.60	6.51	5.23	17.64	6.91	18.87
57	ER11d	ExonRegion	0	11.87	5.53	8.05	4.99	17.37	6.13	22.26
58	ER12a	ExonRegion	0	15.03	8.06	6.90	5.29	13.13	3.45	24.01
59	E12a_E13a	KnownJunction	0	11.43	4.60	5.86	5.42	10.24	2.20	15.56
60	E13_Aa	NovelBoundary	0	1.70	8.80	1.35	0.00	0.00	0.00	3.55
61	ER13a	ExonRegion	0	9.15	6.22	5.38	7.63	12.70	0.57	13.99
62	E13a_E14a	KnownJunction	0	7.46	6.75	4.22	5.82	4.96	1.13	15.28
63	ER14a	ExonRegion	0	6.65	2.97	2.96	3.47	8.52	1.03	8.47
64	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	1.57	1.11	0.00	0.00
65	ER15a	ExonRegion	0	9.80	6.58	4.63	2.45	14.82	2.46	24.92
66	E15a_E16a	KnownJunction	0	14.02	6.78	6.24	5.91	16.44	7.45	28.36
67	ER16a	ExonRegion	0	16.94	9.63	5.64	3.10	23.28	5.17	36.72
68	E16a_E17a	KnownJunction	0	21.18	9.83	4.99	3.09	18.56	6.27	14.95
69	ER17a	ExonRegion	0	16.96	6.63	6.08	2.54	18.46	3.20	25.09
70	E17_Da	NovelBoundary	1	0.00	2.68	0.85	0.00	1.96	0.00	9.03
71	E17a_E18a	KnownJunction	0	17.77	2.26	4.53	2.98	24.48	1.66	27.23
72	E18_Aa	NovelBoundary	1	0.82	6.57	0.80	1.22	4.01	0.00	9.34
73	ER18a	ExonRegion	0	25.66	9.92	11.73	7.87	30.13	6.50	17.63