Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C17orf81	Gene	0	85.95	123.10	53.62	119.87	96.22	111.60	91.14
2	354429	Transcript	0	0.77	0.00	0.00	0.08	9.85	1.23	2.56
3	356683	Transcript	1	85.20	124.28	26.59	74.31	30.74	55.43	32.53
4	396627	Transcript	0	0	0	0	0	0	0	0
5	396628	Transcript	1	27.09	38.88	7.58	16.86	19.36	13.55	15.89
6	IG50	Intergenic	0	26.02	19.63	1.05	3.37	12.82	1.62	0.92
7	IG50_AR1	ActiveIntergenicRegion	0	26.42	19.93	1.07	3.42	13.04	1.63	0.93
8	ER1a	ExonRegion	0	0.77	0.00	0.00	0.08	9.85	1.23	2.56
9	ER2a	ExonRegion	1	21.33	24.35	4.64	10.13	40.10	5.79	14.69
10	E2_Da	KnownBoundary	0	19.69	32.05	9.43	17.12	71.30	14.98	14.50
11	E2a_E2b	KnownJunction	0	1.80	1.50	0.62	0.00	2.35	1.34	5.73
12	ER2b	ExonRegion	1	27.09	38.88	7.58	16.86	19.36	13.55	15.89
13	E2_Ab	KnownBoundary	1	33.81	43.11	8.85	21.62	11.23	7.99	27.01
14	ER2c	ExonRegion	0	39.53	82.47	29.13	114.20	137.49	96.63	71.17
15	E2b_E3a	KnownJunction	1	40.94	87.69	56.52	217.11	254.09	175.70	146.41
16	I2	Intron	1	16.05	25.02	2.58	4.34	4.75	1.62	0.89
17	I2_SR1	SilentIntronRegion	1	16.30	25.40	2.61	4.42	4.82	1.64	0.90
18	E3_Aa	NovelBoundary	1	23.08	39.59	0.76	11.08	1.18	5.79	1.95
19	ER3a	ExonRegion	0	43.36	106.47	59.28	190.60	216.96	170.43	114.69
20	E3_Da	NovelBoundary	1	62.80	67.49	4.56	19.80	0.00	4.42	0.80
21	E3a_E4a	KnownJunction	0	44.95	117.88	54.64	173.14	198.81	185.72	90.69
22	I3	Intron	1	22.69	24.07	1.74	4.30	0.00	3.21	0.00
23	I3_SR1	SilentIntronRegion	1	23.07	24.54	1.78	4.37	0.00	3.29	0.00
24	E4_Aa	NovelBoundary	1	76.26	70.93	3.19	19.91	4.10	3.27	0.89
25	ER4a	ExonRegion	0	89.63	157.44	69.31	260.20	172.35	232.52	138.50
26	E4_Da	NovelBoundary	1	109.97	66.05	2.59	20.43	0.00	0.00	1.33
27	E4a_E5a	KnownJunction	1	49.34	166.95	99.34	303.23	178.48	279.39	165.44
28	I4	Intron	1	56.54	42.88	4.67	8.66	2.17	4.69	0.12
29	I4_SR1	SilentIntronRegion	1	56.66	42.98	4.68	8.68	2.18	4.70	0.12
30	E5_Aa	NovelBoundary	1	60.27	65.68	5.03	10.21	8.05	0.00	0.89
31	ER5a	ExonRegion	0	87.02	168.61	89.60	243.95	232.93	252.19	169.65
32	E5_Da	NovelBoundary	1	79.29	96.34	32.49	55.10	93.78	88.44	1.55
33	E5a_E6a	KnownJunction	1	37.72	57.90	76.88	134.53	153.95	118.45	154.52
34	E5a_E7a	NovelJunction	0	2.07	2.84	5.06	7.56	3.02	13.75	3.98
35	I5	Intron	1	96.57	83.27	6.07	18.88	11.72	6.67	1.47
36	I5_AR1	ActiveIntronRegion	1	28.87	37.80	4.22	13.55	27.14	15.09	0.00
37	I5_SR2	SilentIntronRegion	1	114.37	81.83	6.10	17.61	8.99	4.74	1.04
38	I5_AR5	ActiveIntronRegion	1	119.20	112.56	7.69	24.88	11.71	7.07	2.49
39	E6_Aa	NovelBoundary	1	48.03	118.17	9.01	26.47	6.59	11.42	3.12
40	ER6a	ExonRegion	0	99.54	104.26	95.86	148.81	136.10	141.81	181.24
41	E6_Da	NovelBoundary	1	36.60	92.55	3.05	13.22	3.11	2.63	1.72
42	E6a_E7a	KnownJunction	1	43.31	40.41	82.37	87.07	140.07	127.35	131.78
43	I6	Intron	1	46.60	32.12	4.83	6.26	5.79	1.87	0.59
44	I6_AR1	ActiveIntronRegion	1	33.19	20.12	2.62	6.39	1.16	0.69	0.00
45	I6_SR1	SilentIntronRegion	1	84.52	36.80	6.37	9.88	9.85	3.43	0.67
46	E7_Aa	NovelBoundary	1	47.80	73.14	23.54	7.72	4.06	6.43	0.00
47	ER7a	ExonRegion	0	101.02	118.06	115.06	176.80	147.71	163.15	190.81
48	E7_Da	KnownBoundary	1	78.54	92.50	31.54	42.75	6.43	36.39	19.71
49	E7a_E7b	KnownJunction	1	26.25	31.13	61.99	95.28	105.74	85.65	109.88
50	E7a_E7c	NovelJunction	0	1.70	4.44	4.66	4.52	3.37	14.31	7.51
51	ER7b	ExonRegion	1	55.74	96.20	23.59	72.85	26.09	44.83	22.69
52	E7_Ab	KnownBoundary	1	44.56	119.69	31.04	88.99	37.07	50.14	31.17
53	ER7c	ExonRegion	0	91.60	144.40	108.00	154.67	109.61	165.63	150.25
54	E7_Db	KnownBoundary	0	73.29	143.86	19.36	70.95	15.17	68.88	29.02
55	E7b_E7c	KnownJunction	1	31.09	22.72	62.71	81.63	83.47	100.37	112.56
56	ER7d	ExonRegion	1	114.66	152.36	29.59	75.76	35.40	66.03	42.38
57	E7_Ac	KnownBoundary	1	111.52	132.59	27.46	69.79	32.23	47.41	28.49
58	ER7e	ExonRegion	0	102.36	132.78	71.00	128.79	97.13	123.91	112.22