Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHD3	Gene	0	179.14	60.16	73.52	77.69	50.09	177.00	97.71
2	380358	Transcript	0	0.38	0.83	0.45	2.18	0.11	0.18	0.22
3	403047	Transcript	0	0	0	0	0	0	0	0
4	358181	Transcript	0	55.93	21.38	26.21	23.52	15.45	58.42	24.12
5	330494	Transcript	0	0	0	0	0	0	0	0
6	IG36	Intergenic	0	5.13	4.92	4.53	5.06	2.82	8.72	2.05
7	IG36_AR1	ActiveIntergenicRegion	0	8.01	4.79	4.67	2.00	0.97	18.58	0.91
8	IG36_AR2	ActiveIntergenicRegion	0	12.21	5.00	10.21	6.23	5.48	24.85	2.36
9	IG36_AR3	ActiveIntergenicRegion	0	9.28	3.18	9.01	6.23	5.30	19.05	1.87
10	IG36_AR4	ActiveIntergenicRegion	0	5.73	2.43	5.73	5.55	3.09	11.26	1.35
11	IG36_AR6	ActiveIntergenicRegion	0	13.83	2.43	4.06	4.99	4.05	7.97	4.72
12	IG36_SR3	SilentIntergenicRegion	0	8.07	7.19	7.52	7.29	3.50	13.11	3.45
13	IG36_AR8	ActiveIntergenicRegion	0	7.45	9.19	5.67	10.89	5.76	17.08	3.81
14	IG36_AR9	ActiveIntergenicRegion	0	11.19	7.98	6.31	8.96	5.36	18.03	4.29
15	IG36_AR10	ActiveIntergenicRegion	0	11.01	12.72	6.77	10.72	6.37	15.77	5.53
16	IG36_SR4	SilentIntergenicRegion	0	12.60	12.32	9.38	10.11	5.80	19.75	4.77
17	IG36_AR11	ActiveIntergenicRegion	0	4.19	8.61	5.59	8.25	3.36	13.46	1.92
18	ER1a	ExonRegion	0	0.77	1.66	0.00	3.12	0.22	0.36	0.00
19	E1_Ab	KnownBoundary	0	5.06	3.99	0.00	14.71	0.97	4.05	1.39
20	ER1b	ExonRegion	0	1.81	1.98	0.53	2.28	0.51	3.85	0.94
21	E1a_E3a	KnownJunction	0	29.02	5.12	7.67	12.06	5.37	17.66	17.05
22	ER2a	ExonRegion	0	10.51	2.32	3.13	0.00	0.70	0.00	2.98
23	E2a_E3a	KnownJunction	0	8.58	1.37	0.57	0.00	1.06	0.00	6.79
24	ER3a	ExonRegion	0	93.42	30.04	34.94	54.05	19.64	85.80	48.73
25	E3a_E4a	KnownJunction	0	132.08	49.15	37.74	42.72	29.72	99.78	55.61
26	ER4a	ExonRegion	0	190.28	50.93	63.35	67.61	30.57	135.80	80.47
27	E4a_E5a	KnownJunction	0	201.95	42.59	74.37	52.61	41.61	144.42	75.25
28	ER5a	ExonRegion	0	179.14	50.66	66.89	73.02	46.19	148.71	90.14
29	E5a_E6a	KnownJunction	0	214.75	55.62	75.62	63.37	26.63	171.73	85.93
30	ER6a	ExonRegion	0	73.17	28.85	26.85	39.39	19.11	109.75	41.62
31	E6a_E7a	KnownJunction	0	63.05	25.38	25.26	39.55	8.74	63.03	33.32
32	ER7a	ExonRegion	0	70.17	35.95	29.31	38.34	16.09	73.61	44.35
33	E7a_E8a	KnownJunction	0	59.82	26.35	18.83	28.04	17.15	67.16	24.31
34	ER8a	ExonRegion	0	109.44	40.79	37.73	51.08	21.39	112.57	56.66
35	E8a_E9a	KnownJunction	0	121.74	37.94	56.68	51.42	27.02	101.95	59.12
36	ER9a	ExonRegion	0	124.11	50.72	56.10	64.89	42.84	126.82	85.32
37	E9a_E10a	KnownJunction	0	111.66	54.17	47.81	72.04	32.60	125.13	84.13
38	ER10a	ExonRegion	0	143.67	59.14	54.95	75.32	48.12	137.08	104.73
39	E10a_E11a	KnownJunction	0	161.99	69.65	66.05	72.55	40.18	147.75	95.96
40	ER11a	ExonRegion	0	158.69	67.98	54.78	73.66	42.38	138.63	80.28
41	E11a_E12a	KnownJunction	0	148.66	69.96	50.54	62.61	46.06	126.76	74.97
42	ER12a	ExonRegion	0	173.10	78.71	66.89	88.11	54.15	187.10	125.46
43	E12a_E13a	KnownJunction	0	152.66	102.51	63.49	108.01	49.96	239.32	119.34
44	E13_Aa	NovelBoundary	1	67.08	1.21	25.49	2.87	0.00	2.68	0.00
45	ER13a	ExonRegion	0	237.06	87.18	95.56	109.89	68.43	224.91	162.09
46	E13a_E14a	KnownJunction	0	215.58	60.82	82.49	93.52	81.31	180.26	143.92
47	ER14a	ExonRegion	0	195.34	43.86	82.30	91.08	57.80	174.09	139.09
48	E14a_E15a	KnownJunction	0	223.44	43.19	93.06	83.82	72.04	174.06	157.20
49	ER15a	ExonRegion	0	180.41	56.52	80.58	93.07	59.07	169.38	131.63
50	E15a_E16a	KnownJunction	0	165.30	69.30	54.36	75.07	63.79	131.18	104.20
51	ER16a	ExonRegion	0	169.19	77.47	74.89	89.66	58.12	174.09	127.87
52	E16a_E17a	KnownJunction	0	177.63	84.78	87.41	86.88	61.94	128.37	121.67
53	ER17a	ExonRegion	0	194.20	76.93	95.18	88.42	47.94	167.46	134.80
54	E17a_E18a	KnownJunction	0	265.27	67.23	114.07	49.06	49.24	125.64	121.36
55	ER18a	ExonRegion	0	329.55	73.97	144.01	73.97	68.80	180.67	129.18
56	E18a_E19a	KnownJunction	1	384.12	72.48	145.76	58.81	62.13	181.92	100.12
57	ER19a	ExonRegion	0	345.18	66.19	146.00	79.15	65.05	173.59	127.46
58	E19a_E20a	KnownJunction	0	304.61	63.42	113.74	64.64	77.02	139.47	104.79
59	ER20a	ExonRegion	0	245.79	55.26	111.01	65.37	60.09	144.11	118.50
60	E20a_E21a	KnownJunction	0	185.14	53.09	89.76	71.44	21.07	113.42	108.16
61	ER21a	ExonRegion	0	221.29	60.00	105.87	77.86	63.18	171.89	112.70
62	E21a_E22a	KnownJunction	0	276.92	70.17	128.17	68.59	59.55	173.13	125.43
63	ER22a	ExonRegion	0	211.09	79.11	97.57	80.63	50.76	163.13	108.15
64	E22a_E23a	KnownJunction	0	158.45	49.47	63.99	52.50	60.33	129.20	81.40
65	ER23a	ExonRegion	0	191.67	64.22	88.60	66.64	63.23	147.52	109.46
66	E23a_E24a	KnownJunction	0	165.68	53.75	79.71	50.52	53.69	143.30	101.24
67	ER24a	ExonRegion	0	245.77	70.18	98.30	83.10	73.98	206.89	139.11
68	E24_Da	NovelBoundary	1	140.35	0.00	42.49	8.18	11.69	2.57	0.00
69	E24a_E25a	KnownJunction	0	354.86	74.32	116.01	111.10	63.72	194.46	159.62
70	ER25a	ExonRegion	0	308.30	83.52	121.77	122.88	111.53	214.66	191.88
71	E25a_E26a	KnownJunction	0	397.27	90.14	131.62	138.81	120.73	261.59	172.71
72	ER26a	ExonRegion	0	391.38	99.33	145.18	135.80	117.52	250.81	217.26
73	E26a_E27a	KnownJunction	0	365.38	83.07	142.50	121.23	117.92	217.05	185.33
74	ER27a	ExonRegion	0	338.22	95.22	125.94	108.32	109.54	228.41	190.54
75	E27a_E28a	KnownJunction	0	318.64	91.79	111.63	99.86	126.77	213.06	183.21
76	E27a_E29a	NovelJunction	0	1.24	6.83	1.61	12.49	0.00	37.47	2.78
77	ER28a	ExonRegion	0	326.84	86.55	113.93	95.00	91.26	201.53	183.53
78	E28a_E29a	KnownJunction	0	282.34	80.23	112.32	83.74	78.98	182.40	176.86
79	ER29a	ExonRegion	0	206.77	68.96	87.79	91.79	69.27	188.56	124.44
80	E29a_E30a	KnownJunction	0	210.83	76.45	86.62	87.91	96.45	201.51	136.19
81	ER30a	ExonRegion	0	182.13	77.94	90.07	94.36	63.49	198.53	138.06
82	E30a_E31a	KnownJunction	0	162.04	83.10	80.06	103.95	44.28	161.66	117.98
83	ER31a	ExonRegion	0	298.46	79.38	128.50	107.22	75.33	249.61	135.93
84	E31a_E32a	KnownJunction	0	309.53	104.30	131.56	139.19	63.58	313.07	144.83
85	ER32a	ExonRegion	0	458.71	112.18	172.41	152.74	86.26	374.79	168.64
86	E32a_E33a	KnownJunction	0	400.26	85.86	129.16	112.48	74.32	343.79	154.45
87	ER33a	ExonRegion	0	268.90	83.03	97.71	110.39	68.91	258.64	126.48
88	E33a_E34a	KnownJunction	0	150.03	48.79	67.94	53.15	48.94	167.66	94.90
89	E33a_E35a	KnownJunction	0	55.93	21.38	26.21	23.52	15.45	58.42	24.12
90	ER34a	ExonRegion	0	211.06	59.31	76.07	68.12	61.15	197.04	89.07
91	E34a_E35a	KnownJunction	0	321.88	74.87	94.59	70.41	89.10	229.57	92.27
92	ER35a	ExonRegion	0	404.14	105.07	157.08	136.16	106.62	310.09	166.24
93	E35a_E36a	KnownJunction	0	530.97	130.83	200.83	168.34	121.56	465.94	214.57
94	ER36a	ExonRegion	0	486.96	132.89	193.07	166.56	107.49	380.68	186.09
95	E36a_E37a	KnownJunction	0	359.68	130.88	165.96	164.12	86.93	361.10	175.77
96	ER37a	ExonRegion	0	281.29	100.65	134.20	119.59	80.40	318.22	152.98
97	E37a_E38a	KnownJunction	0	238.00	65.70	84.63	82.60	82.14	204.29	116.64
98	ER38a	ExonRegion	0	140.51	51.90	48.19	69.92	39.03	168.44	64.54
99	E38_Da	NovelBoundary	0	32.08	14.11	16.18	28.69	4.10	72.23	23.06
100	E38a_E39a	KnownJunction	0	115.04	40.46	28.09	53.97	19.57	96.53	62.08
101	E38a_E40a	NovelJunction	0	0.00	2.63	0.00	3.90	0.00	15.57	0.83
102	I38	Intron	0	63.34	18.91	23.21	20.25	14.34	69.14	16.74
103	I38_AR2	ActiveIntronRegion	0	70.76	20.73	25.75	21.84	15.85	76.21	18.64
104	E39_Aa	NovelBoundary	1	32.40	13.14	20.54	12.71	3.14	51.13	7.50
105	ER39a	ExonRegion	0	117.21	68.62	43.25	75.43	41.95	184.93	90.82
106	E39a_E40a	KnownJunction	0	92.76	56.83	32.43	44.56	27.34	125.45	54.66
107	ER40a	ExonRegion	0	67.54	47.51	26.01	49.60	24.32	174.44	44.10
108	E40a_E41a	KnownJunction	0	113.84	53.02	40.96	85.26	28.22	237.74	81.88
109	ER41a	ExonRegion	0	91.96	49.03	42.95	74.78	30.84	212.94	53.08
110	ER41b	ExonRegion	0	0.00	0.00	0.90	1.25	0.00	0.00	0.45
111	IG37	Intergenic	0	11.12	6.45	129.73	105.08	2.83	27.58	21.15
112	IG37_SR2	SilentIntergenicRegion	0	3.10	1.24	21.85	16.10	0.19	3.34	0.92
113	IG37_AR1	ActiveIntergenicRegion	0	18.67	11.31	230.06	187.70	5.27	50.03	39.76