Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SRR	Gene	0	25.25	17.93	26.05	18.43	23.60	12.86	46.38
2	344595	Transcript	0	34.14	28.66	33.11	24.16	34.50	16.39	60.99
3	ER1a	ExonRegion	0	8.40	4.73	9.45	3.08	15.60	3.35	18.42
4	E1a_E2a	KnownJunction	0	13.82	10.30	13.62	4.47	17.66	6.24	41.10
5	I1	Intron	0	5.28	5.17	9.38	6.21	5.19	5.01	3.78
6	I1_SR2	SilentIntronRegion	0	6.79	2.62	5.56	2.57	8.63	1.92	6.02
7	I1_SR3	SilentIntronRegion	0	5.31	9.62	11.19	10.59	3.49	10.25	3.93
8	I1_AR4	ActiveIntronRegion	1	22.61	17.61	45.40	27.53	7.28	9.14	11.59
9	E2_Aa	NovelBoundary	0	22.23	26.19	30.82	37.49	17.61	15.20	13.90
10	ER2a	ExonRegion	0	41.92	35.52	49.45	42.80	18.74	23.65	46.09
11	E2_Da	NovelBoundary	1	53.69	39.96	81.62	85.34	7.65	34.17	15.05
12	E2a_E3a	KnownJunction	0	44.70	23.46	29.40	9.81	30.52	13.67	61.55
13	I2	Intron	1	8.00	9.82	17.23	12.88	6.65	8.92	4.08
14	I2_SR1	SilentIntronRegion	1	8.17	10.03	17.59	13.16	6.70	9.12	4.17
15	E3_Aa	NovelBoundary	1	26.60	45.11	51.60	43.02	16.90	31.65	8.50
16	ER3a	ExonRegion	0	43.20	48.21	48.94	56.72	43.08	39.18	72.87
17	E3_Da	NovelBoundary	1	15.71	39.25	43.89	37.49	13.19	35.05	13.47
18	E3a_E4a	KnownJunction	0	39.81	32.50	31.60	20.45	35.50	15.49	72.56
19	E4_Aa	NovelBoundary	1	28.72	14.79	36.46	36.06	11.04	25.41	6.12
20	ER4a	ExonRegion	0	92.47	55.46	70.02	69.39	51.46	37.78	72.58
21	E4_Da	NovelBoundary	1	21.25	43.72	41.73	42.94	14.09	43.50	11.06
22	E4a_E5a	KnownJunction	1	32.03	31.66	23.50	15.79	31.67	6.62	66.23
23	I4_AR1	ActiveIntronRegion	0	3.84	0.00	3.97	0.00	30.87	0.00	0.00
24	E5_Aa	NovelBoundary	1	68.91	53.91	149.94	86.72	27.41	50.95	47.71
25	ER5a	ExonRegion	0	44.33	52.76	70.19	48.73	60.97	26.91	79.46
26	E5_Da	NovelBoundary	1	73.09	61.87	144.64	94.47	42.26	39.61	44.00
27	E5a_E6a	KnownJunction	1	30.64	22.30	21.28	7.26	27.76	13.21	63.57
28	E5a_E7a	NovelJunction	1	60.17	1.60	161.84	1.14	0.00	0.00	0.76
29	I5	Intron	1	18.05	14.09	57.79	23.53	40.70	17.97	19.24
30	I5_AR1	ActiveIntronRegion	1	18.27	14.27	58.62	23.88	41.33	18.13	19.50
31	E6_Aa	NovelBoundary	1	39.76	41.90	108.70	49.33	56.89	26.83	37.52
32	ER6a	ExonRegion	0	37.73	34.21	43.34	25.35	51.60	25.39	75.10
33	E6_Da	NovelBoundary	1	46.98	50.94	114.50	85.07	32.48	50.36	47.54
34	E6a_E7a	KnownJunction	1	26.84	23.09	25.51	19.99	44.01	6.70	72.70
35	I6	Intron	1	46.27	35.50	97.10	56.42	54.04	32.12	33.68
36	I6_AR1	ActiveIntronRegion	1	19.67	29.42	57.36	43.96	27.87	28.58	27.11
37	I6_SR1	SilentIntronRegion	1	70.76	41.19	133.79	68.02	78.17	35.48	39.82
38	E7_Aa	NovelBoundary	1	167.07	159.49	416.61	307.35	356.72	138.53	285.91
39	ER7a	ExonRegion	0	18.68	20.86	20.01	12.60	21.79	9.59	63.97
40	E7_Da	NovelBoundary	1	73.62	160.73	308.40	319.35	311.26	125.85	233.01
41	E7a_E8a	KnownJunction	0	20.31	26.85	24.06	17.72	49.86	10.85	71.01
42	E8_Aa	NovelBoundary	1	86.55	155.47	275.67	237.75	234.52	80.80	179.73
43	ER8a	ExonRegion	0	17.21	8.00	16.22	8.27	17.22	7.18	37.61