Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NDEL1	Gene	0	207.94	475.84	198.83	396.02	93.25	383.12	419.17
2	334527	Transcript	0	93.81	359.81	69.34	222.15	90.14	304.26	205.48
3	380025	Transcript	0	0	0	0	0	0	0	0
4	402554	Transcript	0	0	0	0	0	0	0	0
5	299734	Transcript	0	4.60	17.53	2.51	7.09	0.64	10.84	9.51
6	ER1a	ExonRegion	0	34.77	26.04	12.35	20.22	19.62	9.41	36.21
7	E1_Ab	KnownBoundary	1	142.10	104.88	51.22	75.31	59.15	40.20	120.28
8	ER1b	ExonRegion	0	105.81	173.48	60.28	152.30	55.46	121.63	144.20
9	E1a_E2a	KnownJunction	0	144.22	324.71	120.35	204.56	46.29	243.42	263.88
10	I1_AR3	ActiveIntronRegion	0	62.06	38.90	29.14	57.83	1.71	37.03	11.68
11	E2_Aa	NovelBoundary	1	109.05	67.33	60.46	84.90	1.91	68.74	13.37
12	ER2a	ExonRegion	0	383.15	517.79	246.10	457.14	83.06	463.60	373.94
13	E2a_E3a	KnownJunction	0	341.99	474.67	268.97	418.21	139.45	442.76	379.73
14	E2a_E4a	NovelJunction	1	3.37	46.05	0.89	13.60	1.18	19.19	9.36
15	ER3a	ExonRegion	0	327.67	566.34	283.18	504.36	146.78	467.73	421.58
16	E3a_E4a	KnownJunction	0	279.76	593.79	284.73	505.09	94.03	463.61	475.26
17	ER4a	ExonRegion	0	277.52	692.36	312.19	605.48	115.22	549.90	542.66
18	E4a_E5a	KnownJunction	0	280.66	610.15	318.78	498.45	161.19	437.67	541.01
19	ER5a	ExonRegion	0	286.34	697.39	343.12	543.69	153.06	483.08	593.74
20	E5a_E6a	KnownJunction	0	354.73	695.93	308.47	556.56	167.53	486.66	511.62
21	ER6a	ExonRegion	0	373.41	751.05	378.04	630.41	173.31	531.89	613.22
22	E6a_E7a	KnownJunction	0	389.61	678.09	389.29	623.31	217.25	534.92	581.77
23	E6a_E8a	NovelJunction	0	23.88	36.91	19.86	34.41	0.97	36.15	4.23
24	ER7a	ExonRegion	0	350.44	671.46	360.28	631.98	185.70	575.65	652.40
25	E7a_E8a	KnownJunction	0	317.46	618.90	326.57	567.34	135.78	525.14	575.13
26	E7a_E10a	NovelJunction	1	3.67	26.30	2.46	17.66	0.00	7.34	4.29
27	ER8a	ExonRegion	0	301.09	706.62	344.72	625.87	144.42	570.67	659.92
28	E8a_E9a	KnownJunction	0	125.47	199.90	195.70	268.39	3.41	138.80	306.03
29	E8a_E10a	KnownJunction	0	93.81	359.81	69.34	222.15	90.14	304.26	205.48
30	E8a_E11a	KnownJunction	0	0.85	5.62	0.00	0.00	0.00	9.14	1.63
31	I8	Intron	0	46.73	23.74	20.00	10.29	3.70	5.04	28.81
32	I8_AR1	ActiveIntronRegion	0	54.20	19.25	23.33	10.21	3.82	3.73	25.45
33	I8_SR2	SilentIntronRegion	0	119.38	19.44	44.80	13.81	3.38	5.21	27.83
34	I8_SR3	SilentIntronRegion	1	69.00	21.67	24.25	9.73	3.98	4.41	29.15
35	E9_Aa	NovelBoundary	1	83.45	23.78	38.15	15.63	9.52	1.50	29.74
36	ER9a	ExonRegion	0	144.14	264.63	215.74	290.15	5.25	177.98	369.37
37	E9_Da	NovelBoundary	1	65.41	23.41	25.79	12.08	5.49	4.56	38.55
38	E9a_E10a	KnownJunction	0	87.92	215.35	130.64	215.27	4.79	156.94	283.89
39	I9	Intron	0	43.64	31.55	22.13	12.76	3.78	6.72	37.43
40	I9_AR1	ActiveIntronRegion	0	44.99	30.33	19.36	14.92	3.78	10.21	42.23
41	I9_AR2	ActiveIntronRegion	0	48.25	32.85	26.49	13.92	3.88	6.86	38.97
42	I9_SR2	SilentIntronRegion	0	63.89	37.51	27.97	18.15	5.34	4.93	47.03
43	ER10a	ExonRegion	0	162.85	445.33	147.01	352.58	75.40	375.41	414.13
44	I10_AR6	ActiveIntronRegion	0	42.17	25.70	18.85	18.99	5.48	14.17	24.26
45	E11_Aa	NovelBoundary	1	563.20	51.12	617.62	106.09	830.59	74.72	117.82
46	ER11a	ExonRegion	0	8.36	29.44	5.01	14.18	1.27	12.55	17.40