Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ABR	Gene	0	57.95	102.18	140.36	127.77	108.29	124.13	120.96
2	382259	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	302538	Transcript	0	0	0	0	0	0	0	0
4	291107	Transcript	1	12.48	42.62	21.49	26.53	1.90	5.98	25.03
5	ER1a	ExonRegion	0	0.68	10.77	4.67	12.40	4.76	24.75	2.64
6	E1a_E2a	KnownJunction	1	0.00	33.81	7.36	20.13	13.05	44.84	6.71
7	ER2a	ExonRegion	1	2.76	48.96	30.87	51.75	25.18	88.95	15.58
8	E2a_E4a	KnownJunction	1	2.05	52.54	33.54	56.51	29.00	92.70	14.68
9	E2a_E5a	NovelJunction	1	0.00	8.09	4.34	7.18	0.92	22.27	0.00
10	ER3a	ExonRegion	1	14.59	33.46	25.66	21.29	2.67	4.77	24.68
11	E3a_E4a	KnownJunction	1	10.38	51.78	17.33	31.78	1.13	7.18	25.38
12	ER4a	ExonRegion	0	48.73	128.23	119.12	112.82	62.78	114.30	96.34
13	E4a_E5a	KnownJunction	0	73.52	141.68	175.89	120.26	74.85	114.68	135.98
14	ER5a	ExonRegion	0	57.93	132.82	140.83	129.94	80.39	148.92	121.99
15	E5a_E6a	KnownJunction	0	66.54	132.01	159.09	121.12	130.16	138.58	110.58
16	E5a_E7a	NovelJunction	0	0.95	5.60	4.07	3.82	2.26	8.44	0.00
17	ER6a	ExonRegion	0	66.19	133.34	212.10	140.20	107.37	172.39	154.14
18	E6a_E7a	KnownJunction	0	66.36	127.13	178.52	136.59	73.12	136.54	154.74
19	ER7a	ExonRegion	0	61.98	146.76	157.60	134.77	72.93	139.68	151.88
20	E7a_E8a	KnownJunction	0	49.77	148.33	104.89	131.55	70.68	130.94	124.33
21	E7a_E9a	NovelJunction	1	0.00	0.00	2.04	5.88	0.00	21.87	0.00
22	ER8a	ExonRegion	0	55.20	150.34	168.77	159.05	90.15	127.50	152.19
23	E8a_E9a	KnownJunction	0	57.08	126.65	197.72	162.79	137.83	112.64	145.09
24	ER9a	ExonRegion	0	51.41	132.95	155.39	151.58	103.64	147.48	140.60
25	E9a_E10a	KnownJunction	0	46.70	126.21	111.70	109.94	57.77	97.77	123.01
26	ER10a	ExonRegion	0	36.05	121.46	87.85	119.36	66.97	112.32	95.64
27	E10a_E11a	KnownJunction	0	44.09	123.16	119.95	147.94	138.32	132.10	147.83
28	ER11a	ExonRegion	0	48.01	119.19	137.17	150.90	85.62	113.95	127.91
29	E11a_E12a	KnownJunction	0	35.87	108.66	101.61	126.33	83.66	71.47	96.35
30	E11a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER12a	ExonRegion	0	74.26	131.60	200.89	173.43	150.02	122.94	155.39
32	E12a_E13a	KnownJunction	0	63.86	130.23	174.84	145.64	148.78	100.23	138.04
33	ER13a	ExonRegion	0	69.16	134.80	206.36	155.18	161.05	127.96	155.72
34	E13a_E14a	KnownJunction	0	86.25	113.91	255.95	174.66	142.03	137.75	140.09
35	ER14a	ExonRegion	0	102.52	137.11	263.11	190.00	151.33	139.93	167.17
36	E14a_E15a	KnownJunction	0	68.08	111.81	242.59	152.33	152.06	134.88	159.91
37	E14a_E16a	NovelJunction	0	0.00	1.05	0.00	4.52	0.99	8.79	0.00
38	ER15a	ExonRegion	0	89.95	141.91	287.85	173.96	197.34	144.90	182.48
39	E15a_E16a	KnownJunction	0	110.82	142.73	269.47	184.54	240.33	122.42	181.21
40	ER16a	ExonRegion	0	88.53	135.58	255.18	182.63	202.12	131.94	165.70
41	E16a_E17a	KnownJunction	0	82.82	148.07	258.75	179.91	191.80	122.77	158.76
42	ER17a	ExonRegion	0	84.62	158.24	246.14	191.85	180.11	145.41	179.65
43	E17a_E18a	KnownJunction	0	61.59	167.01	212.77	177.88	164.51	116.23	165.59
44	ER18a	ExonRegion	0	80.66	175.06	261.17	187.02	164.90	133.20	184.61
45	E18a_E19a	KnownJunction	0	95.25	145.52	271.50	178.58	163.84	161.44	186.65
46	ER19a	ExonRegion	0	75.83	136.80	239.75	164.97	182.46	140.62	186.56
47	E19a_E20a	KnownJunction	0	60.58	120.11	156.23	124.32	192.42	91.84	180.88
48	ER20a	ExonRegion	0	58.89	108.79	168.19	135.52	180.18	98.65	178.49
49	E20_Ab	KnownBoundary	0	59.02	113.91	184.18	136.40	169.53	107.36	168.42
50	ER20b	ExonRegion	0	74.51	116.78	189.31	157.39	167.89	123.68	188.65
51	E20a_E21a	KnownJunction	0	80.06	117.51	164.67	169.59	127.16	139.41	221.21
52	ER21a	ExonRegion	0	71.55	117.33	148.41	158.61	129.20	129.05	170.24
53	E21_Da	NovelBoundary	0	70.36	89.53	115.67	117.60	90.69	94.39	104.72
54	E21a_E22b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	E21b_E22a	KnownJunction	0	104.45	121.64	215.34	173.57	183.45	147.64	191.55
56	ER21b	ExonRegion	0	96.25	113.69	170.33	156.08	146.52	132.20	157.32
57	ER22a	ExonRegion	0	119.14	130.67	222.56	196.77	341.61	171.00	235.14
58	E22_Ab	KnownBoundary	0	115.64	127.57	225.27	212.91	391.58	190.04	264.62
59	ER22b	ExonRegion	0	130.74	142.82	267.36	202.75	211.99	193.66	282.67
60	E22_Da	NovelBoundary	1	30.96	1.13	73.82	0.00	0.00	0.00	0.00
61	E22b_E23a	KnownJunction	0	129.53	161.94	285.21	206.81	123.66	222.57	287.98
62	ER22c	ExonRegion	0	125.45	158.84	283.65	210.11	135.25	227.42	284.85
63	ER23a	ExonRegion	0	94.72	141.06	206.61	191.24	160.44	199.71	239.90
64	E23a_E24a	KnownJunction	0	110.97	126.42	256.80	213.99	375.69	204.19	298.88
65	ER24a	ExonRegion	0	56.19	88.86	121.09	119.41	102.18	126.03	106.36
66	IG12	Intergenic	0	4.54	2.80	6.47	5.11	7.22	2.34	10.66
67	IG12_AR2	ActiveIntergenicRegion	0	3.74	2.82	5.59	4.73	6.81	2.68	7.96
68	IG12_SR1	SilentIntergenicRegion	0	6.56	2.92	8.83	6.31	8.51	1.68	17.43