Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PELP1	Gene	0	59.40	181.21	182.94	224.26	260.55	131.36	84.38
2	269230	Transcript	0	39.48	104.52	116.83	145.27	107.35	80.14	54.01
3	301396	Transcript	0	55.78	182.43	176.54	238.12	283.27	121.37	105.00
4	ER1a	ExonRegion	0	18.92	62.18	53.18	56.25	52.21	41.14	24.14
5	E1a_E2a	KnownJunction	0	51.59	151.35	170.50	161.95	421.94	134.64	76.93
6	E2_Aa	NovelBoundary	1	24.82	3.47	59.84	2.11	5.30	1.55	1.50
7	ER2a	ExonRegion	0	68.21	220.73	238.29	253.00	371.29	153.19	84.55
8	E2a_E3a	KnownJunction	0	70.83	270.02	278.12	315.26	255.47	206.17	91.45
9	ER3a	ExonRegion	0	68.30	275.18	224.09	301.15	269.75	225.81	99.48
10	E3a_E4a	KnownJunction	0	71.55	267.42	203.23	303.80	293.88	193.41	104.28
11	ER4a	ExonRegion	0	104.27	302.21	314.20	343.22	466.75	206.96	129.59
12	E4a_E5a	KnownJunction	0	108.37	382.14	351.38	402.55	378.97	206.47	139.29
13	ER5a	ExonRegion	0	121.07	342.40	387.86	395.39	483.35	202.14	140.64
14	E5a_E6a	KnownJunction	0	114.63	256.04	376.14	327.69	448.06	195.72	147.08
15	E5a_E7a	NovelJunction	0	0.63	29.42	1.41	15.58	0.00	25.57	2.48
16	ER6a	ExonRegion	0	123.92	300.45	403.84	354.35	567.48	175.93	163.79
17	E6a_E7a	KnownJunction	0	114.31	296.13	364.60	346.77	684.16	144.72	152.39
18	ER7a	ExonRegion	0	86.28	256.09	322.79	306.11	483.23	135.79	131.34
19	E7a_E8a	KnownJunction	0	81.45	255.38	291.70	263.33	475.07	112.13	123.21
20	E7a_E9a	NovelJunction	1	0.78	4.15	2.99	18.07	0.00	18.22	3.63
21	ER8a	ExonRegion	0	115.16	309.74	391.28	348.56	528.88	172.56	150.29
22	E8a_E9a	KnownJunction	0	98.79	312.18	381.03	351.70	394.41	191.03	152.64
23	ER9a	ExonRegion	0	93.76	230.67	310.51	264.58	432.39	158.27	138.77
24	E9_Da	KnownBoundary	0	9.68	5.44	28.05	10.05	5.35	5.36	4.50
25	E9a_E10b	KnownJunction	0	84.65	190.34	262.93	239.78	285.74	127.35	106.84
26	ER9b	ExonRegion	0	10.50	11.42	25.46	7.04	10.55	8.40	6.88
27	E9b_E10a	KnownJunction	1	13.47	16.03	27.45	10.10	5.56	3.06	5.75
28	ER10a	ExonRegion	1	16.74	12.27	36.10	7.28	12.65	9.29	9.14
29	E10a_E10c	KnownJunction	0	49.62	110.05	123.46	158.02	0.00	77.85	51.61
30	E10_Ac	KnownBoundary	0	26.25	11.93	64.44	20.67	347.59	11.82	18.52
31	ER10b	ExonRegion	0	43.97	93.63	128.61	101.54	239.66	51.14	50.35
32	ER10c	ExonRegion	0	39.96	71.68	100.52	95.02	216.88	44.87	40.48
33	ER10d	ExonRegion	0	67.84	150.12	178.91	185.51	407.38	94.68	82.44
34	E10_Db	KnownBoundary	0	24.02	48.79	73.07	68.59	143.62	23.21	23.29
35	E10b_E10d	KnownJunction	0	64.47	156.24	166.03	195.95	325.34	100.04	74.72
36	E10_Ad	KnownBoundary	0	45.26	103.75	132.94	132.10	225.32	53.89	68.07
37	ER10e	ExonRegion	0	85.30	208.15	261.92	270.18	518.03	131.59	131.55
38	E10c_E11a	KnownJunction	0	84.55	207.75	290.58	280.47	481.55	131.40	150.57
39	ER10f	ExonRegion	0	96.45	245.01	307.84	329.04	517.65	160.09	156.83
40	ER11a	ExonRegion	0	105.79	287.13	368.50	374.42	417.53	202.17	161.89
41	E11a_E12a	KnownJunction	0	117.40	328.18	409.28	415.14	403.03	257.44	151.57
42	E12_Aa	NovelBoundary	1	49.37	0.00	137.81	1.33	1.98	0.00	1.53
43	ER12a	ExonRegion	0	93.82	289.92	312.79	364.89	369.12	190.36	139.65
44	E12a_E13a	KnownJunction	0	86.65	236.31	293.24	296.00	341.67	180.71	127.31
45	ER13a	ExonRegion	0	67.19	243.77	264.01	314.93	369.29	166.88	123.45
46	E13_Da	KnownBoundary	0	88.62	296.53	282.35	384.80	414.35	186.15	163.79
47	E13a_E15b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER13b	ExonRegion	0	80.66	294.68	277.93	372.99	435.60	192.36	168.72
49	E13b_E14a	KnownJunction	0	80.08	275.67	280.83	347.61	392.66	175.43	175.62
50	E13b_E15a	NovelJunction	0	2.80	4.18	2.47	18.34	0.00	6.27	0.00
51	ER14a	ExonRegion	0	85.41	276.53	276.11	382.46	413.41	178.43	174.29
52	E14a_E15a	KnownJunction	0	81.76	267.50	238.79	393.71	433.14	169.59	160.07
53	ER15a	ExonRegion	0	66.80	331.98	212.80	393.42	363.04	200.82	157.18
54	E15_Ab	KnownBoundary	1	74.97	267.52	206.09	382.23	341.55	171.71	162.58
55	ER15b	ExonRegion	0	69.57	276.25	219.74	346.72	367.04	165.42	162.58
56	E15a_E16a	KnownJunction	0	55.71	246.69	196.46	272.73	414.79	150.75	136.15
57	E16a_E16b	KnownJunction	0	17.17	88.35	72.80	107.23	75.50	68.02	43.54
58	E16_Ab	NovelBoundary	1	46.46	203.16	173.36	228.73	324.68	134.96	110.72
59	ER16a	ExonRegion	0	66.62	300.92	251.51	351.77	488.34	190.77	166.02
60	ER16b	ExonRegion	0	64.29	291.57	250.41	344.58	496.44	196.16	163.70
61	ER16c	ExonRegion	0	66.00	224.34	201.50	287.09	372.22	171.40	126.14
62	E16_Db	KnownBoundary	0	29.41	65.47	68.27	106.82	110.65	62.20	33.16
63	E16b_E16c	KnownJunction	0	25.79	66.47	72.04	137.92	0.00	75.84	44.69
64	E16_Ac	KnownBoundary	0	23.82	54.96	54.56	106.47	80.80	46.74	33.25
65	ER16d	ExonRegion	0	52.25	155.74	132.63	235.93	221.25	136.58	78.52
66	ER16e	ExonRegion	0	45.64	159.73	153.58	257.52	192.22	135.67	84.72
67	E16_Dc	KnownBoundary	0	20.14	57.59	77.82	73.74	64.57	52.07	34.22
68	E16c_E16d	KnownJunction	0	34.63	120.17	120.52	178.02	64.89	111.86	56.68
69	E16_Ad	KnownBoundary	0	24.48	68.41	62.02	85.82	50.07	55.61	42.46
70	ER16f	ExonRegion	0	47.90	158.34	174.09	235.26	163.32	131.18	93.09
71	ER16g	ExonRegion	0	58.03	168.56	153.32	227.29	235.42	147.78	66.82
72	E16d_E17a	KnownJunction	1	12.83	152.72	75.70	155.26	76.21	145.44	65.87
73	ER17a	ExonRegion	0	17.29	92.29	53.96	107.26	96.21	93.41	37.94