Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MYH4	Gene	0	0.00	0.00	0.02	0.13	0.03	4.23	0.00
2	255381	Transcript	0	0.00	0.00	0.01	0.04	0.04	1.44	0.00
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	1.57	0.00	8.39	0.00
5	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.03	0.00
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.15	0.00
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER4a	ExonRegion	0	0.00	0.00	0.00	0.66	0.00	1.29	0.00
10	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.62	0.00
16	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.98	0.00
18	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.02	0.00
20	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	2.68	0.00
26	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.62	0.00
30	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.63	0.00
32	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00
34	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E18_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	8.82	0.00
38	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.02	0.00
41	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.48	0.00
43	E20_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	9.43	0.00
44	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E21_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	13.21	0.00
46	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	7.40	0.00
47	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	I21	Intron	0	0.00	0.00	0.00	0.00	0.00	9.96	0.00
49	I21_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	10.09	0.00
50	E22_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	1.18	12.57	0.00
51	ER22a	ExonRegion	0	0.00	0.00	0.00	1.48	0.00	9.81	0.00
52	E22_Da	NovelBoundary	0	0.00	0.00	0.00	3.36	0.00	19.59	0.00
53	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	I22	Intron	0	0.00	0.00	0.19	0.35	0.00	14.76	0.00
55	I22_SR1	SilentIntronRegion	0	0.00	0.00	0.19	0.35	0.00	14.81	0.00
56	E23_Aa	NovelBoundary	0	0.00	0.00	1.78	0.00	0.00	27.15	0.00
57	ER23a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	9.20	0.00
58	E23_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	14.74	0.00
59	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	I23	Intron	0	0.00	0.00	0.00	1.21	0.00	10.89	0.00
61	I23_SR1	SilentIntronRegion	0	0.00	0.00	0.00	1.21	0.00	10.94	0.00
62	E24_Aa	NovelBoundary	0	0.00	0.00	0.00	1.38	0.00	11.47	0.00
63	ER24a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.16	0.00
64	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E25_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	8.79	0.00
66	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.74	0.00
67	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	I25_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	8.61	0.00
69	E26_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	29.96	0.00
70	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	4.28	0.00
71	E26_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	38.22	0.00
72	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E27_Aa	NovelBoundary	0	0.00	0.00	0.00	1.06	0.00	31.25	0.00
74	ER27a	ExonRegion	0	0.00	0.00	0.00	0.49	0.00	23.05	0.00
75	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.76	0.00
77	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
78	ER29a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.54	0.00
79	E29a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
80	ER30a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.42	0.00
81	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
82	ER31a	ExonRegion	0	0.00	0.00	0.56	0.00	0.00	1.53	0.00
83	E31a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
84	ER32a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00
85	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
86	ER33a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.75	0.00
87	E33a_E34a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
88	ER34a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.13	0.00
89	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	E35_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	9.30	0.00
91	ER35a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.64	0.00
92	E35a_E36a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
93	ER36a	ExonRegion	0	0.00	0.00	0.00	0.00	0.66	2.22	0.00
94	E36a_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
95	E37_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	9.30	0.00
96	ER37a	ExonRegion	0	0.00	0.00	0.00	0.55	0.11	3.78	0.00
97	E37_Da	NovelBoundary	0	0.00	0.00	0.00	1.63	0.00	16.91	0.00
98	E37a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	1.98	0.00	0.00
99	ER38a	ExonRegion	0	0.00	0.00	0.00	0.00	0.60	3.50	0.00
100	E38_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	14.87	0.00
101	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
102	E39_Aa	NovelBoundary	0	0.00	0.00	0.65	0.00	0.00	8.87	0.00
103	ER39a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	4.85	0.00
104	E39a_E40a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
105	ER40a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.82	0.00