Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GPS2	Gene	0	102.38	138.87	147.32	143.36	168.03	142.15	86.07
2	315601	Transcript	0	0.00	0.21	0.09	0.50	0.00	0.00	0.00
3	380728	Transcript	0	0.46	0.31	0.51	2.19	1.92	1.23	0.10
4	389167	Transcript	0	0.29	5.48	1.21	11.79	2.13	9.97	2.00
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.00	0.00	0.00	0.07	0.00	0.00	0.00
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	0.00	0.00	0.00	0.94	0.00	0.00	0.00
9	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER4a	ExonRegion	0	0.00	0.00	0.00	0.88	0.00	0.00	0.00
11	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER6a	ExonRegion	0	0.00	0.00	0.09	0.00	0.00	0.00	0.00
15	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER7a	ExonRegion	0	0.00	0.59	0.13	1.03	0.00	0.00	0.00
17	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER8a	ExonRegion	0	0.00	1.21	0.56	1.53	0.00	0.00	0.00
19	E8_Da	NovelBoundary	1	43.83	41.96	70.00	65.13	103.09	28.30	27.90
20	E8a_E9b	KnownJunction	0	0.00	1.31	0.52	2.98	0.00	0.00	0.00
21	ER9a	ExonRegion	0	0.91	0.01	0.01	0.02	0.19	0.00	0.21
22	E9_Ab	KnownBoundary	0	5.52	2.99	8.67	5.53	11.20	1.34	6.03
23	ER9b	ExonRegion	0	3.03	3.82	2.80	3.93	4.90	3.81	2.05
24	E9a_E10b	KnownJunction	0	44.38	47.81	48.53	48.47	99.82	30.55	32.59
25	ER10a	ExonRegion	0	0.29	5.48	1.21	11.79	2.13	9.97	2.00
26	E10_Ab	KnownBoundary	0	3.94	14.97	6.57	31.56	11.32	26.34	8.15
27	ER10b	ExonRegion	0	40.31	115.68	71.45	132.34	73.87	137.55	46.72
28	E10a_E11a	KnownJunction	0	89.04	173.89	158.29	217.14	104.61	228.71	85.56
29	I10	Intron	0	20.00	30.90	27.98	40.85	14.77	33.94	7.24
30	I10_AR1	ActiveIntronRegion	0	20.10	31.07	28.12	41.07	14.85	34.10	7.28
31	E11_Aa	NovelBoundary	1	36.58	55.30	47.12	49.90	24.00	58.16	10.32
32	ER11a	ExonRegion	0	187.47	314.22	371.67	353.90	299.25	355.72	181.04
33	E11a_E12a	KnownJunction	0	216.45	384.98	431.33	321.84	374.17	366.46	186.28
34	ER12a	ExonRegion	0	277.04	445.79	512.73	424.44	353.57	461.80	210.20
35	E12a_E13a	KnownJunction	0	294.96	476.41	562.08	454.89	717.77	458.20	254.70
36	ER13a	ExonRegion	0	323.04	441.80	556.02	399.50	587.97	394.25	295.00
37	E13_Da	NovelBoundary	0	41.32	85.75	59.42	126.33	8.23	134.51	15.16
38	E13a_E14a	KnownJunction	0	318.94	341.55	476.06	332.19	479.91	290.94	278.99
39	E13a_E15a	NovelJunction	0	5.72	11.45	0.79	3.06	0.00	13.83	0.00
40	I13	Intron	0	14.44	29.22	14.06	27.82	6.77	22.34	6.12
41	I13_AR1	ActiveIntronRegion	0	14.70	29.76	14.27	28.30	6.91	22.72	6.22
42	E14_Aa	NovelBoundary	0	34.70	87.12	43.56	114.51	11.55	93.45	16.55
43	ER14a	ExonRegion	0	261.84	395.24	402.77	382.64	490.83	351.88	241.12
44	E14_Da	NovelBoundary	1	44.36	39.07	76.75	54.13	9.68	53.14	16.88
45	E14a_E15a	KnownJunction	0	251.92	320.83	343.74	362.18	480.14	351.48	195.60
46	E14a_E17a	NovelJunction	0	0.00	8.04	1.51	12.73	2.03	14.71	1.43
47	I14	Intron	0	33.40	37.01	53.76	35.95	11.18	43.90	14.17
48	I14_AR1	ActiveIntronRegion	0	33.71	37.37	54.31	36.31	11.29	44.34	14.31
49	E15_Aa	NovelBoundary	1	33.90	67.78	59.58	49.01	15.84	43.31	11.57
50	ER15a	ExonRegion	0	351.10	400.63	455.20	424.01	691.68	413.80	301.53
51	E15a_E16a	KnownJunction	0	397.15	377.76	482.74	422.51	636.74	455.49	336.23
52	ER16a	ExonRegion	0	344.53	452.47	457.45	491.37	571.11	463.26	325.45
53	E16a_E17a	KnownJunction	0	321.01	379.04	338.41	397.89	540.59	396.26	202.78
54	ER17a	ExonRegion	0	358.84	413.72	415.13	432.62	515.46	431.49	271.11
55	E17a_E18a	KnownJunction	0	392.13	436.71	491.05	472.47	547.30	482.32	326.60
56	ER18a	ExonRegion	0	298.11	338.64	341.68	352.31	433.93	346.33	213.04
57	E18a_E19a	KnownJunction	0	220.12	296.68	236.61	303.15	190.74	257.52	161.82
58	ER19a	ExonRegion	0	134.75	162.04	150.75	163.65	188.16	164.31	90.91
59	ER19b	ExonRegion	0	0.77	3.64	2.03	8.73	5.67	2.45	0.00
60	ER19c	ExonRegion	0	0.00	0.61	1.02	4.36	3.64	2.45	0.00