Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	JMJD3	Gene	0	172.44	866.97	144.87	656.53	16.11	1096.61	66.77
2	254846	Transcript	0	243.09	1276.42	217.40	925.91	26.68	1427.42	109.86
3	IG32_SR3	SilentIntergenicRegion	0	3.23	7.52	2.18	1.98	0.37	3.30	0.43
4	ER1a	ExonRegion	0	5.39	26.03	4.33	24.08	3.07	26.04	2.29
5	E1a_E2a	KnownJunction	0	1.65	49.76	2.44	39.50	6.75	38.27	2.02
6	ER2a	ExonRegion	1	213.16	815.95	155.18	508.42	9.44	840.27	40.01
7	E2a_E3a	KnownJunction	0	153.65	1097.36	148.42	626.51	11.85	1208.27	64.16
8	E2a_E5a	NovelJunction	1	0.00	9.80	0.89	5.69	0.00	44.59	0.00
9	ER3a	ExonRegion	0	126.14	1182.21	125.18	628.54	8.81	1245.54	53.53
10	E3a_E4a	KnownJunction	0	142.80	1137.97	129.62	570.38	11.07	1155.07	51.82
11	E3a_E5a	NovelJunction	1	11.17	45.06	23.87	42.61	1.04	114.35	2.39
12	ER4a	ExonRegion	0	135.73	1197.70	139.77	626.13	12.23	1177.74	51.23
13	E4_Da	NovelBoundary	1	47.65	27.82	50.54	34.62	0.00	24.84	4.97
14	E4a_E5a	KnownJunction	0	149.61	1358.29	148.39	755.95	11.04	1362.29	70.61
15	E5_Aa	NovelBoundary	1	66.59	57.77	73.72	32.10	0.00	32.24	6.69
16	ER5a	ExonRegion	0	191.12	1404.33	206.81	866.03	13.96	1503.23	78.42
17	E5a_E6a	KnownJunction	0	209.81	1480.03	250.17	874.28	16.07	1637.76	100.08
18	ER6a	ExonRegion	0	210.29	1610.90	230.59	1024.80	15.84	1885.75	102.47
19	E6a_E7a	KnownJunction	0	192.47	1659.96	218.75	1000.01	8.97	1873.01	111.00
20	ER7a	ExonRegion	0	233.94	1811.78	289.28	1215.69	29.08	2043.86	139.52
21	E7a_E8a	KnownJunction	0	386.16	1972.07	412.20	1377.04	19.34	2444.41	169.43
22	ER8a	ExonRegion	0	147.36	1675.59	137.28	984.33	8.29	1628.00	80.87
23	E8a_E9a	KnownJunction	0	90.49	1843.13	151.52	1138.75	6.99	1868.67	113.15
24	ER9a	ExonRegion	0	37.87	615.21	31.47	432.29	4.77	626.58	24.82
25	E9a_E10a	KnownJunction	0	51.64	427.17	22.88	307.62	0.95	361.72	15.56
26	ER10a	ExonRegion	0	85.32	582.51	58.61	473.72	6.06	632.49	34.74
27	E10a_E11a	KnownJunction	0	101.57	980.16	75.53	684.62	3.48	928.24	37.15
28	ER11a	ExonRegion	0	88.24	545.13	68.32	451.25	6.63	660.06	33.43
29	E11a_E12a	KnownJunction	0	191.87	1233.26	196.96	1013.64	15.72	1332.32	85.54
30	E12_Aa	NovelBoundary	1	89.83	31.68	80.89	8.48	0.00	8.63	1.13
31	ER12a	ExonRegion	0	323.73	1499.92	327.84	1263.04	30.92	1840.96	141.74
32	E12a_E13a	KnownJunction	0	228.79	1079.81	305.48	918.77	30.59	1244.80	126.90
33	ER13a	ExonRegion	0	238.31	1060.60	296.60	894.88	27.37	1357.23	111.79
34	E13a_E14a	KnownJunction	0	211.34	1010.43	261.44	823.81	23.40	1151.34	104.86
35	ER14a	ExonRegion	0	344.54	1437.48	333.51	1139.91	43.29	1668.53	146.59
36	E14a_E15a	KnownJunction	0	362.97	1689.81	311.33	1406.71	37.37	2026.20	168.55
37	ER15a	ExonRegion	0	489.98	1916.90	380.72	1549.69	53.48	2206.61	205.31
38	E15a_E16a	KnownJunction	0	561.42	1865.72	407.33	1500.71	65.10	2238.99	225.30
39	ER16a	ExonRegion	0	458.82	1737.04	383.60	1366.72	64.18	1915.45	193.35
40	E16_Da	NovelBoundary	1	62.14	175.99	53.36	138.79	10.86	255.11	6.46
41	E16a_E17a	KnownJunction	0	281.19	1389.10	248.69	1109.57	34.65	1515.04	142.02
42	E16a_E18a	NovelJunction	0	12.92	6.36	8.74	10.78	1.18	6.81	10.62
43	ER17a	ExonRegion	0	289.96	1309.05	235.40	1001.70	42.22	1443.25	135.45
44	E17a_E18a	KnownJunction	0	278.72	1180.01	266.45	959.35	43.98	1434.99	138.04
45	ER18a	ExonRegion	0	273.70	1243.11	237.14	974.24	42.61	1370.23	147.05
46	E18_Da	NovelBoundary	1	106.21	205.78	81.70	143.42	2.33	202.69	9.37
47	E18a_E19a	KnownJunction	0	219.62	1016.57	183.11	755.79	44.17	1173.27	123.75
48	E19_Aa	NovelBoundary	1	84.97	122.35	57.65	133.34	1.18	184.62	9.36
49	ER19a	ExonRegion	0	330.04	1377.65	265.22	1074.72	48.02	1540.15	155.31
50	E19a_E20a	KnownJunction	0	353.19	1407.12	259.05	1093.48	35.13	1401.82	165.59
51	ER20a	ExonRegion	0	536.94	1919.99	389.67	1526.68	63.64	2157.00	211.03
52	E20_Da	NovelBoundary	1	47.53	64.97	46.03	46.05	0.00	90.05	4.17
53	E20a_E21a	KnownJunction	0	518.81	1876.36	353.71	1506.48	59.27	2041.07	193.92
54	I20	Intron	1	31.77	38.25	38.21	38.74	0.23	82.44	2.11
55	I20_SR1	SilentIntronRegion	1	31.92	38.43	38.39	38.93	0.23	82.82	2.12
56	ER21a	ExonRegion	0	462.73	1863.80	304.69	1492.33	60.82	2080.57	189.54
57	E21a_E22a	KnownJunction	0	365.58	1684.79	255.48	1337.14	56.13	1910.61	189.25
58	ER22a	ExonRegion	0	176.09	614.23	138.03	494.73	10.31	1181.39	46.67
59	IG33	Intergenic	0	19.04	15.24	3.42	7.79	0.20	24.54	2.75
60	IG33_AR1	ActiveIntergenicRegion	0	2.31	4.86	0.68	2.49	0.00	9.81	0.00
61	IG33_SR1	SilentIntergenicRegion	0	24.38	18.93	4.22	9.93	0.09	32.38	3.04
62	IG33_AR2	ActiveIntergenicRegion	0	14.09	11.14	2.94	3.74	0.81	8.58	3.71