Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SKIP	Gene	0	94.45	69.74	73.20	62.38	47.59	58.39	51.68
2	397335	Transcript	0	0	0	0	0	0	0	0
3	350761	Transcript	0	0	0	0	0	0	0	0
4	320345	Transcript	0	6.98	7.36	7.01	4.42	2.12	2.08	1.68
5	406424	Transcript	0	11.27	3.90	6.35	4.73	2.91	4.12	1.27
6	IG20	Intergenic	0	8.47	8.42	5.90	3.10	24.69	9.36	15.92
7	IG20_AR3	ActiveIntergenicRegion	0	16.28	18.54	13.93	6.46	52.20	22.40	35.22
8	IG20_AR2	ActiveIntergenicRegion	0	10.78	7.21	4.54	3.74	30.74	6.37	17.46
9	ER1a	ExonRegion	0	1.54	1.67	1.52	0.00	5.62	1.23	0.93
10	E1_Ac	KnownBoundary	0	14.69	5.75	9.13	5.72	25.43	5.17	8.83
11	ER1b	ExonRegion	0	4.53	4.05	6.13	4.16	16.06	4.02	3.82
12	ER1c	ExonRegion	0	34.27	28.54	21.54	29.75	26.76	31.83	24.10
13	E1a_E2a	KnownJunction	0	9.00	4.18	2.67	2.84	3.16	4.48	1.59
14	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E1a_E4a	KnownJunction	0	28.61	57.11	23.41	41.26	22.87	51.51	31.97
16	ER2a	ExonRegion	0	11.53	5.67	5.42	4.99	2.97	6.54	2.25
17	ER2b	ExonRegion	1	30.67	9.57	26.35	9.86	8.14	10.12	4.06
18	E2a_E3a	KnownJunction	0	17.77	1.23	12.82	6.39	5.03	0.00	0.00
19	E2a_E4a	KnownJunction	0	13.95	14.71	14.03	8.83	4.24	4.15	3.35
20	ER3a	ExonRegion	0	14.44	4.93	6.62	5.32	1.63	6.48	0.89
21	E3a_E4a	KnownJunction	0	3.59	3.47	4.22	4.12	1.75	3.11	1.63
22	ER4a	ExonRegion	0	87.62	81.16	84.13	73.06	53.49	68.78	57.77
23	E4a_E5a	KnownJunction	0	92.98	90.51	90.49	46.38	66.99	46.98	53.28
24	E4a_E6a	NovelJunction	1	12.02	20.99	8.48	20.59	0.00	39.90	7.80
25	ER5a	ExonRegion	0	91.38	108.55	110.51	55.51	73.50	60.32	74.61
26	E5a_E6a	KnownJunction	0	93.08	115.70	107.13	64.56	54.20	73.67	92.62
27	ER6a	ExonRegion	0	149.61	134.93	139.41	98.33	84.17	97.85	95.65
28	E6a_E7a	KnownJunction	0	178.80	123.53	166.49	133.29	81.45	108.32	101.85
29	ER7a	ExonRegion	0	163.34	145.19	130.76	108.47	95.30	113.74	94.24
30	E7_Da	NovelBoundary	1	22.56	25.48	18.87	7.45	5.67	12.73	4.70
31	E7a_E8a	KnownJunction	0	167.92	103.48	120.88	110.59	84.24	90.15	91.94
32	ER8a	ExonRegion	0	208.81	117.46	153.43	108.29	92.51	92.44	93.14
33	E8a_E9a	KnownJunction	0	208.17	87.27	154.57	96.15	101.64	80.75	96.54
34	ER9a	ExonRegion	0	145.09	90.98	106.72	74.64	59.47	59.34	80.64
35	E9a_E10a	KnownJunction	0	109.45	73.85	81.26	58.03	43.80	41.24	54.46
36	ER10a	ExonRegion	0	73.22	82.49	53.37	77.02	58.66	52.59	64.09
37	E10a_E11a	KnownJunction	0	93.91	63.84	87.24	80.00	88.25	44.33	79.22
38	ER11a	ExonRegion	0	141.97	88.51	99.64	99.34	89.38	68.84	101.66
39	E11a_E12a	KnownJunction	0	109.69	97.10	89.80	91.13	58.76	64.02	99.19
40	ER12a	ExonRegion	0	113.77	108.27	97.50	107.95	74.19	78.17	105.63
41	E12a_E13a	KnownJunction	0	131.87	107.27	101.35	108.69	89.74	86.78	102.60
42	E13_Aa	NovelBoundary	1	52.57	4.15	38.33	0.00	0.90	0.00	0.83
43	ER13a	ExonRegion	0	121.00	108.87	97.17	101.76	83.15	87.64	101.88
44	E13a_E14a	KnownJunction	0	100.47	82.83	94.00	95.71	64.78	82.36	88.64
45	ER14a	ExonRegion	0	95.66	61.78	69.37	59.26	37.05	60.87	39.63
46	ER14b	ExonRegion	0	10.06	1.92	9.24	7.16	4.28	6.13	5.29
47	IG19_AR1	ActiveIntergenicRegion	0	0.88	0.83	0.59	1.28	14.52	0.65	0.69