Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MPDU1	Gene	0	173.59	123.52	169.16	91.78	118.93	101.82	131.22
2	250124	Transcript	0	116.67	56.20	84.05	44.27	59.81	53.45	54.16
3	301597	Transcript	0	1.46	0.26	0.50	0.00	0.00	0.00	0.15
4	396501	Transcript	0	0	0	0	0	0	0	0
5	359822	Transcript	0	61.77	63.39	71.28	72.01	0.00	62.85	66.87
6	IG22	Intergenic	0	16.37	33.46	12.74	22.40	11.18	49.44	11.30
7	IG22_AR1	ActiveIntergenicRegion	0	20.12	41.08	16.92	25.00	16.05	59.39	13.26
8	IG22_SR1	SilentIntergenicRegion	0	10.77	39.75	11.33	13.98	3.86	40.54	9.93
9	IG22_AR2	ActiveIntergenicRegion	0	10.82	25.86	8.10	11.01	2.31	24.43	6.49
10	IG22_AR3	ActiveIntergenicRegion	0	14.59	28.50	10.33	22.05	8.97	45.15	10.43
11	ER1a	ExonRegion	0	2.78	6.16	1.69	4.42	3.28	8.90	0.90
12	E1_Ab	KnownBoundary	0	6.96	12.11	6.73	8.29	11.41	24.98	13.13
13	E1_Ac	KnownBoundary	0	10.40	17.52	3.35	8.10	4.22	21.73	4.79
14	ER1b	ExonRegion	1	11.68	15.55	5.49	7.73	7.29	23.42	2.83
15	ER1c	ExonRegion	0	92.43	102.00	124.63	91.99	85.76	87.06	94.07
16	E1a_E2a	KnownJunction	0	32.65	33.39	47.54	29.61	17.01	33.85	34.50
17	ER2a	ExonRegion	0	33.42	96.71	45.16	51.41	26.50	59.48	55.29
18	E2a_E3a	KnownJunction	0	63.47	134.98	80.95	80.76	52.79	94.90	103.21
19	ER3a	ExonRegion	0	185.49	139.43	223.55	105.06	111.54	104.40	169.98
20	E3_Da	KnownBoundary	0	308.06	147.49	368.25	128.63	177.25	104.87	242.47
21	E3a_E8a	KnownJunction	0	2.34	0.00	1.01	0.00	0.00	0.00	0.00
22	ER3b	ExonRegion	0	225.02	177.37	261.45	132.86	264.49	141.36	267.35
23	E3b_E4a	KnownJunction	0	124.49	175.31	112.86	102.38	142.24	122.66	182.14
24	E4_Aa	NovelBoundary	0	9.41	50.81	15.43	21.51	4.20	44.27	14.63
25	ER4a	ExonRegion	0	142.33	201.03	155.52	138.22	118.37	131.30	170.05
26	E4_Da	NovelBoundary	0	28.49	32.00	29.50	16.63	4.33	8.50	45.60
27	E4a_E5a	KnownJunction	0	183.47	214.64	222.87	162.00	108.60	192.21	207.45
28	E4a_E6a	NovelJunction	0	8.76	8.14	11.90	9.08	0.00	0.00	23.27
29	ER5a	ExonRegion	0	206.11	229.95	225.40	168.69	196.41	201.96	243.16
30	E5_Da	KnownBoundary	0	89.21	98.41	78.82	57.30	106.00	78.09	93.77
31	E5a_E5b	KnownJunction	0	61.77	63.39	71.28	72.01	0.00	62.85	66.87
32	E5_Ab	KnownBoundary	0	66.98	61.32	80.66	52.91	75.52	49.71	60.61
33	ER5b	ExonRegion	0	161.63	181.62	177.70	127.40	193.69	141.60	179.67
34	ER5c	ExonRegion	0	129.43	138.78	149.09	128.70	138.20	116.38	127.90
35	E5b_E6a	KnownJunction	0	125.59	120.77	128.76	116.95	101.16	100.69	109.74
36	E6_Ab	NovelBoundary	0	156.42	149.64	161.68	132.67	120.77	120.84	169.47
37	ER6a	ExonRegion	0	134.04	138.49	145.35	133.37	113.26	125.69	133.47
38	ER6b	ExonRegion	0	150.92	144.81	165.55	139.16	125.69	134.37	149.49
39	ER6c	ExonRegion	0	241.83	158.16	265.81	130.98	144.14	152.20	185.52
40	E6b_E7a	KnownJunction	0	217.49	160.44	233.45	99.29	118.24	150.83	171.09
41	ER7a	ExonRegion	0	217.67	173.60	244.57	107.83	133.45	136.09	177.28
42	ER7b	ExonRegion	0	243.92	177.04	280.14	115.06	175.74	133.02	200.88
43	E7_Db	KnownBoundary	0	412.88	175.36	335.79	99.07	156.60	160.91	180.79
44	ER7c	ExonRegion	0	230.56	106.24	166.41	84.12	116.34	97.99	107.42
45	E7_Dc	NovelBoundary	1	10.58	9.72	5.33	13.38	12.03	11.20	40.86
46	E8_Aa	NovelBoundary	1	6.48	33.05	4.87	14.68	33.45	11.34	80.53
47	ER8a	ExonRegion	0	0.58	0.52	0.00	0.00	0.00	0.00	0.31