Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MYH1	Gene	0	0.01	0.00	0.01	0.06	0.05	4.46	0.00
2	226207	Transcript	0	0.00	0.00	0.01	0.00	0.02	0.96	0.00
3	379814	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	10.75	0.00
7	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	6.08	0.00
8	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	16.05	0.00
9	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	14.53	0.00
11	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.86	0.00
12	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	9.97	0.00
14	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.33	0.00
15	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.13	0.00
17	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.48	0.00
18	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	10.56	0.00
19	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.06	1.50	0.00
20	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.90	0.00	0.00
21	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.37	0.82	0.00
22	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.27	0.00
24	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	17.66	0.00
25	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.33	0.00
31	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.01	0.00
33	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.90	0.00
35	E14_Da	KnownBoundary	0	0.00	0.00	0.00	1.68	13.72	1.66	0.00
36	E14a_E30b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER14b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E14b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E15_Da	NovelBoundary	0	0.00	0.00	0.56	0.00	0.00	9.65	0.00
41	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.90	0.00
43	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.35	0.83	0.00
49	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	2.93	0.00
51	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	E21_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	15.76	0.00
53	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	0.30	4.08	0.00
54	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER22a	ExonRegion	0	0.00	0.00	0.20	0.00	0.00	2.55	0.00
56	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	E23_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	10.00	0.00
58	ER23a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.01	0.00
59	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	ER24a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.03	0.00
61	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.11	0.00
63	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E26_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	9.22	0.00
65	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	4.01	0.00
66	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	E27_Aa	NovelBoundary	0	0.00	0.00	0.00	1.25	0.00	12.68	0.00
68	ER27a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	4.06	0.00
69	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
70	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	2.93	0.00
71	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	ER29a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E29a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	ER30a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.27	0.00
75	E30_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	19.97	0.00
76	ER30b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	5.73	0.00
77	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
78	I30	Intron	0	0.00	0.00	0.00	0.13	0.00	46.91	0.00
79	I30_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.13	0.00	47.04	0.00
80	E31_Aa	NovelBoundary	0	0.00	0.00	0.00	2.90	0.00	93.00	0.00
81	ER31a	ExonRegion	0	0.00	0.00	0.00	1.03	0.00	48.50	0.00
82	E31_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	11.07	0.00
83	E31a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
84	I31	Intron	0	0.00	0.00	0.00	0.35	0.00	14.60	0.00
85	I31_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.35	0.00	14.70	0.00
86	E32_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	15.17	0.00
87	ER32a	ExonRegion	0	0.24	0.00	0.00	0.00	0.00	8.42	0.00
88	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
89	ER33a	ExonRegion	0	0.28	0.00	0.00	0.00	0.00	1.46	0.00
90	E33a_E34a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
91	ER34a	ExonRegion	0	0.01	0.00	0.00	0.00	0.13	7.82	0.00
92	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
93	I34	Intron	0	0.00	0.00	0.00	0.00	0.00	8.31	0.00
94	I34_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	8.41	0.00
95	E35_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	16.40	0.00
96	ER35a	ExonRegion	0	0.00	0.00	0.00	0.00	0.20	5.90	0.00
97	E35a_E36a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
98	ER36a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	2.22	0.00
99	E36a_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
100	ER37a	ExonRegion	0	0.00	0.00	0.00	0.55	0.10	4.36	0.00
101	E37_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	12.01	0.00
102	E37a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	1.18	0.00	0.00
103	I37	Intron	0	0.00	0.00	0.20	1.10	0.00	10.49	0.00
104	I37_SR1	SilentIntronRegion	0	0.00	0.00	0.20	1.11	0.00	10.57	0.00
105	E38_Aa	NovelBoundary	0	0.00	0.00	1.75	0.00	0.00	12.38	0.00
106	ER38a	ExonRegion	0	0.00	0.00	0.00	0.00	0.22	6.17	0.00
107	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
108	ER39a	ExonRegion	0	0.00	0.00	0.00	0.00	0.08	2.95	0.00
109	E39a_E40a	KnownJunction	0	0.00	0.00	0.00	0.00	0.92	0.00	0.00
110	E40_Aa	NovelBoundary	0	0.00	0.00	0.00	4.20	0.00	35.48	0.00
111	ER40a	ExonRegion	0	0.00	0.00	0.00	0.37	0.13	3.91	0.00