Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ALOX12	Gene	0	3.91	5.13	2.19	4.43	5.89	6.89	1.95
2	251535	Transcript	0	1.70	2.60	0.85	2.75	5.86	3.64	1.09
3	406228	Transcript	0	3.82	4.31	2.74	2.81	2.67	5.79	0.58
4	ER1a	ExonRegion	0	0.00	3.94	0.46	3.55	0.26	7.92	0.56
5	E1_Da	NovelBoundary	0	1.42	4.05	0.53	5.77	0.00	12.89	1.42
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.99	0.00	0.00
7	Ix	Intron	0	6.85	17.35	1.42	13.20	2.22	20.91	6.05
8	Ix_SR1	SilentIntronRegion	0	2.19	14.34	0.79	8.44	1.37	14.10	3.53
9	Ix_AR1	ActiveIntronRegion	0	9.60	19.19	1.80	16.04	2.72	24.98	7.56
10	E2_Aa	NovelBoundary	0	10.46	31.24	2.74	18.64	6.41	42.24	8.83
11	ER2a	ExonRegion	0	5.56	21.38	2.70	16.04	5.33	21.16	9.07
12	E2_Da	NovelBoundary	0	6.76	33.92	4.10	22.27	3.00	32.72	12.10
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	1.52	4.36	0.00	0.00
14	Ix	Intron	0	16.24	12.39	4.27	10.23	5.36	19.62	6.83
15	Ix_SR1	SilentIntronRegion	0	16.41	12.50	4.32	10.34	5.40	19.84	6.91
16	E3_Aa	NovelBoundary	0	10.60	6.94	2.89	1.25	1.18	11.39	1.49
17	ER3a	ExonRegion	0	1.40	1.11	1.26	3.77	4.85	2.15	0.63
18	E3_Da	NovelBoundary	0	7.86	6.36	1.48	10.81	0.90	13.75	2.21
19	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	2.38	5.49	0.00	0.00
20	E4_Aa	NovelBoundary	0	10.53	6.02	3.22	9.86	1.13	1.31	1.55
21	ER4a	ExonRegion	0	7.72	3.00	0.42	2.73	9.36	6.00	1.65
22	E4_Da	NovelBoundary	0	24.00	18.07	6.75	12.43	4.61	9.33	5.62
23	E4a_E5a	KnownJunction	0	0.63	0.00	0.00	1.68	4.54	0.00	0.00
24	Ix	Intron	1	15.44	4.76	3.52	2.44	1.77	18.28	2.67
25	Ix_SR1	SilentIntronRegion	0	15.67	4.82	3.58	2.47	1.80	18.50	2.72
26	E5_Aa	NovelBoundary	0	22.40	9.35	4.48	15.06	4.13	9.03	2.29
27	ER5a	ExonRegion	0	7.23	1.79	3.55	5.02	6.63	6.25	2.54
28	E5_Da	NovelBoundary	0	13.77	7.46	5.14	11.84	3.00	22.78	7.28
29	E5a_E6a	KnownJunction	0	0.00	0.00	0.79	0.00	7.49	0.00	0.54
30	Ix	Intron	0	3.82	4.82	1.17	8.35	1.98	12.30	2.04
31	Ix_SR1	SilentIntronRegion	0	3.85	4.86	1.18	8.42	2.00	12.40	2.05
32	E6_Aa	NovelBoundary	0	14.17	33.50	2.74	25.66	1.75	39.66	10.23
33	ER6a	ExonRegion	0	4.78	12.48	2.02	13.47	10.37	16.67	3.15
34	E6_Da	NovelBoundary	0	15.05	24.85	2.01	15.04	4.29	40.04	4.82
35	E6a_E7a	KnownJunction	0	0.00	0.00	1.39	0.00	5.65	0.00	0.00
36	Ix	Intron	0	8.48	5.75	1.94	5.64	2.45	8.25	5.56
37	Ix_AR1	ActiveIntronRegion	0	8.36	11.91	2.58	11.97	1.94	18.58	7.16
38	E7_Aa	NovelBoundary	0	5.37	10.80	0.73	4.39	1.11	5.47	8.33
39	ER7a	ExonRegion	0	1.76	3.76	1.48	3.90	8.31	3.83	2.11
40	E7_Da	NovelBoundary	0	3.17	10.93	0.62	4.58	0.00	2.44	2.95
41	E7a_E8a	KnownJunction	0	0.00	1.08	0.80	0.00	11.25	0.00	0.00
42	ER8a	ExonRegion	0	5.06	4.45	1.46	1.83	7.62	1.79	2.68
43	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	7.01	0.00	0.00
44	ER9a	ExonRegion	0	0.67	0.00	0.55	0.00	3.25	3.13	0.00
45	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	3.02	3.32	0.00
46	ER10a	ExonRegion	0	1.60	1.11	0.91	0.59	4.44	1.69	0.60
47	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	10.86	0.00	0.00
48	E11_Aa	NovelBoundary	0	1.03	4.39	0.89	5.53	0.00	12.27	0.89
49	ER11a	ExonRegion	0	0.96	3.00	0.84	2.50	6.72	6.10	0.42
50	E11a_E12b	KnownJunction	0	0.00	0.00	0.00	1.57	1.11	0.00	0.00
51	ER12a	ExonRegion	0	3.82	4.31	2.74	2.81	2.67	5.79	0.58
52	E12_Ab	KnownBoundary	0	3.94	4.12	1.71	1.54	2.07	8.87	1.43
53	ER12b	ExonRegion	0	1.74	2.68	0.60	2.00	6.57	3.65	1.33
54	E12_Da	NovelBoundary	0	22.87	26.80	7.89	25.57	8.74	34.52	11.01
55	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	1.14	3.50	0.00	1.48
56	E13_Aa	NovelBoundary	0	0.85	2.63	0.88	3.93	0.00	9.33	1.55
57	ER13a	ExonRegion	0	2.05	4.77	1.49	1.61	7.35	2.72	1.33
58	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	2.76	1.94	0.00	0.00
59	E14_Aa	NovelBoundary	0	6.23	5.78	3.29	4.33	0.00	10.37	1.78
60	ER14a	ExonRegion	0	6.58	3.01	4.87	3.64	6.34	6.99	1.25