Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ENO3	Gene	0	9.49	14.08	12.43	21.63	37.40	11.47	5.23
2	381335	Transcript	0	0.38	0.94	0.85	0.00	7.07	0.00	0.00
3	323997	Transcript	0	0.96	0.26	1.03	1.47	1.68	2.46	2.55
4	IG3	Intergenic	0	2.86	4.68	4.53	7.32	13.96	4.64	3.55
5	IG3_AR1	ActiveIntergenicRegion	0	5.34	4.26	10.13	7.20	44.59	4.03	12.27
6	IG3_SR1	SilentIntergenicRegion	0	1.09	3.66	2.70	3.41	8.12	4.17	0.28
7	IG3_AR2	ActiveIntergenicRegion	0	2.06	4.38	3.22	4.07	11.24	6.78	2.01
8	IG3_SR2	SilentIntergenicRegion	0	0.66	1.68	2.20	3.68	11.93	5.17	0.93
9	IG3_SR3	SilentIntergenicRegion	0	1.99	6.41	3.48	10.37	1.56	4.12	1.24
10	ER1a	ExonRegion	0	0.77	0.24	0.00	0.00	0.81	0.00	0.00
11	ER1b	ExonRegion	0	2.63	3.31	4.57	3.96	19.88	4.04	0.54
12	E1_Da	KnownBoundary	0	4.44	1.52	4.83	4.39	5.28	6.24	2.24
13	E1a_E2a	KnownJunction	0	0.00	1.63	1.70	0.00	13.32	0.00	0.00
14	ER1c	ExonRegion	0	2.12	0.78	2.74	3.18	1.97	4.41	2.88
15	E1b_E2a	KnownJunction	0	0.77	0.00	0.00	0.00	1.04	2.97	4.43
16	E2_Aa	NovelBoundary	1	2.57	1.52	9.20	7.67	2.03	6.08	0.75
17	ER2a	ExonRegion	0	2.91	8.25	5.67	10.08	12.85	5.24	3.60
18	E2a_E3a	KnownJunction	0	3.89	1.34	4.53	2.68	11.18	7.02	2.21
19	ER3a	ExonRegion	0	7.59	10.48	13.96	11.08	33.34	7.13	2.80
20	E3a_E4a	KnownJunction	1	8.70	9.93	13.08	13.06	57.66	0.00	3.58
21	E3a_E5a	NovelJunction	0	4.16	14.87	2.16	9.89	0.95	7.69	1.40
22	ER4a	ExonRegion	1	12.50	9.20	15.43	9.64	46.83	0.85	3.48
23	E4a_E5a	KnownJunction	0	9.31	5.70	14.03	10.19	31.28	2.71	4.53
24	ER5a	ExonRegion	0	12.31	12.98	19.32	15.89	29.98	6.31	3.39
25	E5a_E6a	KnownJunction	0	14.72	20.26	20.49	21.10	34.16	6.86	1.78
26	ER6a	ExonRegion	0	9.31	17.66	14.97	25.27	34.41	7.83	4.92
27	E6a_E7a	KnownJunction	0	11.42	13.19	15.06	25.30	50.46	8.31	4.59
28	ER7a	ExonRegion	0	19.67	19.29	17.41	33.81	59.81	15.70	7.02
29	E7a_E8a	KnownJunction	0	22.63	21.88	19.82	37.47	75.22	25.67	8.47
30	ER8a	ExonRegion	0	18.32	21.74	21.90	31.34	61.58	30.24	8.11
31	E8_Da	NovelBoundary	1	8.78	30.37	26.24	51.83	34.07	20.26	3.54
32	E8a_E9a	KnownJunction	0	0.00	0.00	1.29	2.36	31.86	1.34	7.80
33	I8	Intron	0	14.62	18.26	14.64	24.28	24.62	15.34	3.82
34	I8_AR1	ActiveIntronRegion	0	14.77	18.46	14.79	24.54	24.86	15.50	3.87
35	E9_Aa	NovelBoundary	1	12.77	18.28	9.04	30.86	18.83	5.01	4.11
36	ER9a	ExonRegion	0	8.28	17.12	11.51	27.58	44.59	11.59	7.49
37	E9_Da	NovelBoundary	0	0.82	4.18	3.32	1.68	5.03	8.87	0.63
38	E9a_E10a	KnownJunction	0	5.54	15.53	4.45	28.17	26.93	13.37	5.22
39	ER10a	ExonRegion	0	3.05	14.53	8.76	32.86	34.18	10.29	5.99
40	E10a_E11a	KnownJunction	1	4.12	16.52	13.06	33.13	28.82	3.19	8.90
41	ER11a	ExonRegion	0	2.08	13.75	7.45	21.16	24.19	5.59	5.82
42	E11a_E12a	KnownJunction	0	1.37	10.17	5.13	19.56	14.75	9.30	2.89
43	ER12a	ExonRegion	0	1.21	7.67	2.64	9.03	11.53	6.59	2.94
44	ER12b	ExonRegion	0	0.00	0.00	0.34	1.25	2.02	0.00	0.34