Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CENTB1	Gene	0	0.68	2.21	0.71	3.13	38.25	2.86	0.91
2	158762	Transcript	0	0.29	1.28	0.37	1.82	40.77	1.50	0.79
3	ER1a	ExonRegion	0	0.72	0.76	0.21	1.18	16.06	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	30.15	0.00	0.00
5	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	27.74	0.00	0.00
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	22.04	0.00	0.00
7	ER3a	ExonRegion	0	0.45	0.77	0.00	0.77	22.92	2.21	0.43
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	15.17	0.00	0.00
9	ER4a	ExonRegion	0	0.01	0.00	0.59	0.00	33.68	0.00	0.00
10	E4a_E5a	KnownJunction	0	0.00	0.00	0.86	0.00	44.93	1.23	0.00
11	E5_Aa	NovelBoundary	0	2.97	7.57	6.04	1.46	1.18	3.81	0.00
12	ER5a	ExonRegion	0	0.00	0.00	0.33	0.00	29.65	0.00	0.00
13	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	25.43	0.00	0.00
14	I5_AR3	ActiveIntronRegion	0	1.00	1.37	2.10	3.16	7.77	0.69	0.95
15	E6_Aa	NovelBoundary	0	0.00	3.18	4.18	8.34	10.26	2.81	3.32
16	ER6a	ExonRegion	0	0.95	1.51	0.56	4.12	31.09	2.03	0.54
17	E6_Da	NovelBoundary	0	0.00	3.23	3.75	3.36	0.97	14.18	0.75
18	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	36.45	0.00	0.00
19	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	41.21	0.00	0.00
20	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	51.43	0.00	0.00
21	ER8a	ExonRegion	0	0.00	0.00	1.07	2.10	45.38	1.05	0.53
22	E8a_E9a	KnownJunction	0	0.00	0.00	0.53	0.00	38.75	0.00	0.00
23	ER9a	ExonRegion	0	0.02	0.00	0.64	2.33	54.66	1.10	0.00
24	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	60.93	0.00	0.00
25	ER10a	ExonRegion	0	0.50	0.00	0.47	0.00	73.06	4.19	0.00
26	E10_Da	NovelBoundary	0	0.85	8.35	0.00	5.17	1.13	3.89	2.06
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	86.03	0.00	0.00
28	ER11a	ExonRegion	0	0.00	0.49	0.00	0.10	80.66	0.00	0.00
29	E11a_E12a	KnownJunction	0	0.00	1.31	0.00	0.00	64.34	0.00	0.00
30	E12_Aa	NovelBoundary	0	0.72	7.01	0.68	6.12	2.31	9.06	0.00
31	ER12a	ExonRegion	0	0.95	5.16	1.02	2.67	54.53	1.85	0.47
32	E12_Da	NovelBoundary	0	0.00	1.21	0.00	3.01	0.92	9.78	0.53
33	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	49.77	0.00	0.00
34	ER13a	ExonRegion	0	1.70	0.72	0.00	3.06	60.03	2.24	1.25
35	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	54.80	0.00	0.00
36	E14_Aa	NovelBoundary	0	0.83	1.63	1.37	9.05	0.92	4.13	0.00
37	ER14a	ExonRegion	0	0.83	2.62	0.24	4.02	39.62	1.72	0.00
38	E14_Da	NovelBoundary	0	2.57	9.22	2.13	7.69	0.00	3.30	0.00
39	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	42.76	0.00	0.00
40	ER15a	ExonRegion	0	0.04	0.02	0.00	0.29	47.18	0.00	0.00
41	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	42.95	0.00	0.00
42	ER16a	ExonRegion	0	0.99	1.93	1.98	4.71	47.27	1.92	0.56
43	E16_Da	NovelBoundary	0	4.07	6.25	5.46	8.34	3.16	4.29	3.91
44	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	45.60	0.00	0.00
45	ER17a	ExonRegion	0	0.69	1.63	0.89	2.77	43.92	1.65	1.16
46	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	47.35	0.00	0.00
47	I17	Intron	0	2.02	5.52	3.59	7.96	6.46	8.23	3.28
48	I17_AR1	ActiveIntronRegion	0	2.03	5.54	3.61	7.99	6.48	8.27	3.30
49	ER18a	ExonRegion	0	0.23	4.24	1.79	2.74	43.43	5.92	1.18
50	E18_Da	NovelBoundary	0	0.63	10.09	8.33	4.04	4.38	1.66	3.48
51	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	36.26	0.00	0.00
52	E19_Aa	NovelBoundary	0	4.26	9.83	4.22	11.97	1.87	4.29	0.00
53	ER19a	ExonRegion	0	0.89	2.12	1.24	9.31	33.84	4.95	2.20
54	E19_Da	NovelBoundary	0	2.44	5.81	1.45	11.87	2.07	1.66	0.00
55	E19a_E20a	KnownJunction	0	0.92	2.57	0.00	4.98	31.19	1.10	0.54
56	E20_Aa	NovelBoundary	0	1.77	4.49	1.78	10.02	2.35	7.61	0.00
57	ER20a	ExonRegion	0	1.02	1.29	1.24	5.52	34.74	6.56	0.83
58	E20a_E21a	KnownJunction	0	0.00	0.00	0.56	7.56	19.62	3.22	0.89
59	I20	Intron	0	7.35	7.60	2.02	8.04	0.99	5.85	3.10
60	I20_AR2	ActiveIntronRegion	0	13.35	14.56	4.06	15.03	1.84	10.38	6.01
61	E21_Aa	NovelBoundary	0	8.18	21.07	6.71	13.65	2.12	23.88	2.12
62	ER21a	ExonRegion	0	0.00	4.49	0.04	6.68	17.23	4.24	6.23
63	E21_Da	NovelBoundary	0	6.56	18.99	3.88	12.25	4.82	9.92	1.23
64	E21a_E22a	KnownJunction	0	0.00	12.56	0.00	5.74	14.29	6.30	12.81
65	E22_Aa	NovelBoundary	0	1.69	24.62	3.79	9.24	2.14	3.73	2.32
66	ER22a	ExonRegion	0	1.58	10.78	1.55	7.69	15.04	11.08	4.22