Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ANKRD11	Gene	0	103.24	149.33	175.17	366.48	128.69	197.27	151.73
2	378330	Transcript	0	75.22	113.86	118.11	271.13	0.00	115.19	130.50
3	378332	Transcript	0	216.70	145.33	299.22	426.82	0.00	238.46	180.99
4	378334	Transcript	0	10.47	26.73	26.84	56.43	15.69	32.03	14.25
5	301030	Transcript	0	0	0	0	0	0	0	0
6	378329	Transcript	1	33.44	62.62	19.48	20.58	51.71	13.28	54.98
7	330736	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	IG22_AR4	ActiveIntergenicRegion	0	2.37	1.19	1.22	1.54	10.65	4.55	1.46
9	ER1a	ExonRegion	0	0.34	4.21	0.00	8.18	0.00	1.23	0.00
10	ER1b	ExonRegion	0	8.99	31.94	12.71	62.65	14.35	28.34	13.21
11	E1a_E2a	KnownJunction	0	53.86	122.87	95.91	292.45	93.85	136.30	83.88
12	E1a_E3a	NovelJunction	0	0.00	17.10	0.00	13.00	0.00	4.69	0.00
13	I1_AR1	ActiveIntronRegion	1	40.27	4.51	41.99	3.81	9.76	5.03	3.04
14	I1_SR2	SilentIntronRegion	1	36.43	5.22	30.26	5.23	10.69	3.41	2.87
15	I1_AR2	ActiveIntronRegion	1	59.04	6.07	33.87	9.35	11.07	8.58	3.94
16	I1_AR3	ActiveIntronRegion	1	64.52	6.70	36.60	8.51	12.65	5.28	4.12
17	I1_AR4	ActiveIntronRegion	1	38.82	5.29	30.49	5.06	11.47	6.77	2.09
18	I1_SR3	SilentIntronRegion	1	25.84	3.64	25.28	2.79	6.51	1.67	2.37
19	I1_AR12	ActiveIntronRegion	1	25.66	4.68	20.85	1.53	5.04	0.22	2.75
20	ER2a	ExonRegion	0	68.77	215.27	143.18	410.75	87.47	252.50	120.89
21	E2_Da	NovelBoundary	1	40.91	8.93	21.24	7.18	6.87	1.34	4.30
22	E2a_E3a	KnownJunction	0	58.08	203.74	114.73	397.10	71.07	249.43	106.64
23	E2a_E4a	NovelJunction	0	5.67	17.10	9.33	28.66	6.41	6.78	1.63
24	I2_AR1	ActiveIntronRegion	1	43.50	3.39	31.72	1.86	12.63	1.40	2.64
25	I2_SR7	SilentIntronRegion	0	21.68	5.18	21.97	3.33	12.32	1.46	5.47
26	I2_AR20	ActiveIntronRegion	0	41.57	15.57	28.55	10.23	17.14	5.79	8.56
27	ER3a	ExonRegion	0	107.27	327.51	186.84	539.89	132.89	330.86	179.86
28	E3a_E4a	KnownJunction	0	142.60	327.74	261.53	609.74	198.92	381.76	220.62
29	ER4a	ExonRegion	0	145.66	315.98	226.35	530.07	168.98	316.55	180.25
30	E4a_E5a	KnownJunction	1	20.73	66.05	9.41	14.76	37.35	13.19	51.03
31	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E4a_E6b	KnownJunction	0	80.60	174.10	173.61	440.93	97.91	243.18	107.84
33	I4_SR3	SilentIntronRegion	0	33.89	20.18	33.20	9.27	11.86	1.96	6.58
34	ER5a	ExonRegion	1	46.14	59.19	29.54	26.40	66.07	13.37	58.92
35	E5_Da	NovelBoundary	1	62.85	106.53	48.95	36.57	103.23	24.55	99.65
36	I5_AR1	ActiveIntronRegion	1	27.12	76.21	23.09	31.72	52.72	24.05	69.77
37	I5_SR1	SilentIntronRegion	0	21.28	8.79	33.27	8.18	7.72	1.82	11.01
38	I5_AR3	ActiveIntronRegion	0	29.69	13.65	21.66	13.87	15.81	4.58	9.20
39	E6_Ab	NovelBoundary	1	27.76	0.00	55.91	1.68	0.00	2.68	3.64
40	ER6a	ExonRegion	0	20.94	53.45	53.68	112.85	31.38	64.06	28.50
41	ER6b	ExonRegion	0	81.47	181.14	197.74	406.43	108.57	216.89	119.26
42	E6a_E7a	KnownJunction	0	101.66	234.87	185.82	494.25	177.94	207.27	149.92
43	ER7a	ExonRegion	0	88.07	198.99	147.06	458.62	123.59	192.80	125.40
44	E7a_E8a	KnownJunction	0	101.36	192.88	140.79	533.37	141.34	194.03	168.08
45	ER8a	ExonRegion	0	107.04	226.28	181.18	553.99	186.41	227.96	185.48
46	E8_Da	NovelBoundary	1	64.21	69.99	87.95	146.54	71.74	35.48	46.05
47	E8a_E9a	KnownJunction	0	61.44	162.02	107.78	388.16	103.44	172.32	160.90
48	E8a_E11a	NovelJunction	0	1.00	12.56	0.86	18.67	6.02	9.70	0.72
49	I8	Intron	1	34.07	47.38	60.66	78.42	40.65	23.76	19.08
50	I8_AR1	ActiveIntronRegion	0	42.96	57.73	77.32	98.57	52.18	27.49	23.94
51	ER9a	ExonRegion	1	60.94	184.18	120.13	479.67	123.08	223.15	191.30
52	E9a_E10a	KnownJunction	1	72.52	181.80	157.82	534.75	124.97	240.50	255.21
53	E9a_E11a	NovelJunction	0	0.70	20.62	0.57	27.71	11.53	29.21	0.00
54	ER10a	ExonRegion	0	82.18	183.37	170.11	495.28	163.67	204.04	205.19
55	E10_Da	KnownBoundary	1	29.37	67.39	63.66	155.88	74.62	72.36	66.17
56	E10a_E10b	KnownJunction	0	75.22	113.86	118.11	271.13	0.00	115.19	130.50
57	E10_Ab	KnownBoundary	0	71.00	85.51	112.63	195.41	82.81	99.32	86.35
58	ER10b	ExonRegion	0	120.34	180.77	204.43	426.71	169.10	195.67	186.86
59	ER10c	ExonRegion	0	167.12	174.02	234.45	471.15	248.24	211.11	230.31
60	E10_Db	KnownBoundary	0	166.40	157.42	236.54	403.74	366.75	164.07	187.83
61	ER10d	ExonRegion	0	291.75	203.58	396.64	578.92	322.86	274.48	282.88
62	E10_Ac	KnownBoundary	0	178.87	105.30	239.29	326.96	214.14	161.04	166.03
63	E10_Dc	KnownBoundary	0	58.70	30.76	76.26	82.63	40.25	55.69	52.31
64	E10c_E10d	KnownJunction	0	216.70	145.33	299.22	426.82	0.00	238.46	180.99
65	E10_Ad	KnownBoundary	0	115.61	114.33	174.34	272.18	63.95	156.97	106.53
66	ER10e	ExonRegion	0	335.13	232.97	466.00	663.82	245.77	336.43	313.33
67	ER10f	ExonRegion	0	336.58	260.22	474.30	678.60	221.41	361.67	315.44
68	ER10g	ExonRegion	0	230.47	208.56	298.94	533.72	211.31	277.48	225.15
69	E10_Dd	KnownBoundary	0	204.50	142.10	242.07	449.01	300.08	176.66	207.40
70	ER10h	ExonRegion	0	167.27	147.49	281.03	389.26	172.32	199.80	180.84
71	E10_De	KnownBoundary	1	64.79	131.07	156.25	351.43	106.16	163.32	140.26
72	E10e_E10e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	ER10i	ExonRegion	0	67.70	116.67	128.42	308.22	111.32	164.84	129.66
74	E10_Ae	KnownBoundary	0	184.01	125.63	283.22	393.31	176.38	254.52	226.94
75	ER10j	ExonRegion	0	194.34	182.00	339.31	476.29	199.90	333.84	263.19
76	E10_Df	KnownBoundary	0	229.92	184.01	414.10	469.54	350.03	411.35	308.64
77	ER10k	ExonRegion	0	89.81	143.38	158.06	373.57	114.03	184.85	157.10
78	E10g_E11a	KnownJunction	0	56.28	97.26	91.37	256.74	173.17	128.13	117.12
79	ER11a	ExonRegion	0	72.80	137.03	94.77	317.74	82.01	163.87	120.92
80	E11a_E12a	KnownJunction	0	97.12	206.15	165.89	450.90	228.22	255.91	206.11
81	ER12a	ExonRegion	0	73.47	159.40	110.61	372.89	122.16	197.51	151.89
82	E12a_E13a	KnownJunction	0	53.44	116.88	78.15	284.73	58.39	157.80	113.50
83	ER13a	ExonRegion	0	44.21	93.40	76.05	291.48	129.24	135.44	121.09
84	E13a_E14a	KnownJunction	0	67.09	98.83	119.52	365.54	185.51	188.48	206.21
85	I13_SR1	SilentIntronRegion	0	24.55	15.46	18.63	17.64	9.09	10.41	6.55
86	ER14a	ExonRegion	0	83.31	133.04	137.64	279.74	125.58	251.20	100.08