Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FUK	Gene	0	25.21	8.26	9.33	5.10	6.67	1.83	16.86
2	288078	Transcript	0	0	0	0	0	0	0	0
3	378912	Transcript	0	0.39	0.02	0.11	0.02	0.18	0.28	0.40
4	393626	Transcript	0	0.77	1.21	0.00	0.00	0.00	0.00	0.67
5	ER1a	ExonRegion	0	9.18	1.75	0.51	0.28	1.44	0.00	2.14
6	E1a_E2a	KnownJunction	1	18.14	2.86	2.90	0.00	4.24	0.00	5.40
7	ER2a	ExonRegion	0	15.24	3.31	3.93	1.83	2.13	0.90	10.39
8	E2a_E3a	KnownJunction	1	7.53	2.73	1.24	1.11	1.18	0.00	11.05
9	ER3a	ExonRegion	0	22.53	4.04	7.54	2.13	4.60	0.61	17.20
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E3a_E4b	KnownJunction	1	11.62	4.26	4.18	4.66	5.65	0.00	20.18
12	ER4a	ExonRegion	0	1.17	0.05	0.34	0.05	0.54	0.85	0.31
13	E4_Ab	KnownBoundary	0	1.57	1.37	1.48	0.00	0.00	1.10	0.00
14	ER4b	ExonRegion	1	22.64	5.35	4.43	6.48	5.69	0.86	26.36
15	E4a_E5a	KnownJunction	1	24.92	8.96	5.85	5.96	3.23	1.53	24.46
16	ER5a	ExonRegion	0	19.67	10.09	8.71	4.53	5.02	0.49	16.84
17	E5a_E6a	KnownJunction	0	15.92	10.67	5.48	2.11	1.13	0.00	12.50
18	ER6a	ExonRegion	0	20.06	9.57	5.86	2.92	6.32	0.02	14.19
19	E6_Da	NovelBoundary	0	10.30	2.29	8.97	2.98	0.90	0.00	2.91
20	E6a_E7a	KnownJunction	0	18.24	5.33	5.27	3.03	7.65	0.00	17.93
21	E7_Aa	NovelBoundary	1	13.47	1.39	6.94	0.00	2.07	2.95	0.76
22	ER7a	ExonRegion	0	32.26	3.98	13.29	1.64	7.40	1.59	19.12
23	E7_Da	NovelBoundary	1	14.85	3.84	2.97	0.00	0.00	1.18	1.68
24	E7a_E8a	KnownJunction	0	25.82	3.42	8.90	0.00	3.02	1.37	15.56
25	I7	Intron	0	12.72	2.62	4.04	1.62	0.70	0.26	2.03
26	I7_AR1	ActiveIntronRegion	0	12.80	2.64	4.06	1.62	0.70	0.27	2.04
27	E8_Aa	NovelBoundary	1	10.97	4.70	6.88	1.60	2.21	0.00	1.33
28	ER8a	ExonRegion	0	28.65	2.38	10.67	1.94	3.87	0.89	12.29
29	E8a_E9a	KnownJunction	0	20.96	6.88	10.20	1.54	3.41	1.66	8.40
30	ER9a	ExonRegion	0	26.45	6.57	9.73	1.01	7.96	1.15	15.68
31	E9a_E10a	KnownJunction	0	22.31	4.23	6.84	0.00	3.27	1.26	16.11
32	ER10a	ExonRegion	0	17.15	6.12	5.82	3.41	5.06	0.14	14.51
33	E10a_E11a	KnownJunction	0	14.24	8.41	6.16	4.74	1.15	1.37	7.02
34	ER11a	ExonRegion	0	15.63	6.92	7.05	5.82	3.84	1.08	18.79
35	E11a_E12a	KnownJunction	0	18.63	5.12	7.96	8.72	2.84	1.66	14.06
36	ER12a	ExonRegion	0	24.18	5.45	9.08	5.01	4.07	3.10	14.71
37	E12a_E13a	KnownJunction	0	29.42	8.51	13.69	1.68	8.32	0.00	21.58
38	ER13a	ExonRegion	0	27.29	7.56	9.44	4.58	5.24	3.28	16.13
39	E13a_E14a	KnownJunction	0	20.58	5.60	6.84	1.35	5.97	0.00	17.56
40	ER14a	ExonRegion	0	30.15	11.05	8.98	3.93	9.74	1.45	17.34
41	E14a_E15a	KnownJunction	0	33.10	12.82	9.76	8.15	5.21	2.71	14.65
42	ER15a	ExonRegion	0	14.09	8.41	4.71	4.56	3.17	0.99	9.73
43	E15a_E16a	KnownJunction	0	7.76	12.72	5.91	6.18	4.06	0.00	8.15
44	ER16a	ExonRegion	0	7.37	7.65	3.11	9.41	3.44	0.44	9.55
45	E16a_E17a	KnownJunction	1	7.06	11.19	2.37	5.72	6.16	2.71	11.77
46	ER17a	ExonRegion	0	13.86	10.25	4.20	3.08	4.32	0.63	11.70
47	E17a_E18a	KnownJunction	0	19.03	16.13	8.88	4.58	4.17	1.07	16.18
48	ER18a	ExonRegion	0	16.19	5.81	6.84	3.89	4.45	1.10	12.10
49	E18a_E19a	KnownJunction	0	18.36	2.68	8.90	3.36	2.95	2.33	14.06
50	ER19a	ExonRegion	0	25.60	5.87	8.67	3.84	4.55	0.30	18.09
51	E19_Da	KnownBoundary	0	39.42	8.09	9.10	4.36	5.14	0.00	22.50
52	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
53	ER19b	ExonRegion	0	29.13	7.21	8.71	3.68	5.00	0.00	17.87
54	E19b_E20a	KnownJunction	0	27.44	7.51	6.94	5.31	6.55	1.13	17.91
55	ER20a	ExonRegion	0	23.45	8.68	8.86	6.18	6.20	0.00	16.66
56	E20a_E21a	KnownJunction	0	16.09	9.96	7.37	5.09	6.29	0.00	20.16
57	I20	Intron	0	14.36	1.47	4.72	1.24	2.11	0.26	2.08
58	I20_AR6	ActiveIntronRegion	0	11.47	0.50	4.27	0.54	1.73	0.00	2.72
59	I20_SR3	SilentIntronRegion	0	14.46	2.10	5.02	0.83	1.56	0.67	1.24
60	I20_AR7	ActiveIntronRegion	1	22.07	2.61	6.54	1.78	3.19	0.35	2.69
61	ER21a	ExonRegion	0	35.01	7.84	11.10	8.04	12.46	1.54	21.41
62	E21a_E22a	KnownJunction	0	42.13	8.38	9.13	17.64	6.34	1.05	20.09
63	ER22a	ExonRegion	0	37.11	9.43	10.70	7.53	8.46	1.25	19.93
64	E22a_E23a	KnownJunction	0	34.35	1.00	5.88	7.34	2.28	2.49	11.98
65	E23_Aa	NovelBoundary	0	10.51	8.22	4.21	6.58	3.20	1.66	3.20
66	ER23a	ExonRegion	0	41.17	14.44	14.23	7.22	10.85	3.77	24.79
67	E23a_E24a	KnownJunction	0	47.28	17.29	15.71	12.73	3.50	3.94	28.29
68	ER24a	ExonRegion	0	41.62	12.46	17.91	7.68	12.09	4.89	25.96
69	ER24b	ExonRegion	0	0.77	1.21	0.00	0.00	0.00	0.00	0.67