Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC009053.7	Gene	0	0.90	1.39	1.00	1.34	0.22	0.62	1.40
2	339953	Transcript	0	0.20	0.23	0.42	0.51	0.04	0.26	0.25
3	268492	Transcript	0	1.30	1.84	1.32	1.58	0.49	0.66	1.58
4	IG39_AR11	ActiveIntergenicRegion	0	6.79	7.21	18.11	6.18	79.91	9.58	33.81
5	IG39_AR10	ActiveIntergenicRegion	0	23.05	15.45	43.50	20.57	204.95	18.83	86.16
6	IG39_AR9	ActiveIntergenicRegion	0	26.79	18.22	47.90	24.23	210.10	22.59	103.41
7	IG39_SR10	SilentIntergenicRegion	0	29.88	21.46	51.18	27.16	217.13	24.38	118.28
8	IG39_AR8	ActiveIntergenicRegion	0	32.40	19.84	47.76	25.77	211.10	20.43	119.40
9	IG39_SR9	SilentIntergenicRegion	0	24.08	15.84	41.88	13.99	139.95	18.13	95.49
10	IG39_AR7	ActiveIntergenicRegion	0	14.86	15.19	32.85	7.27	86.92	14.51	73.42
11	IG39_SR8	SilentIntergenicRegion	0	12.07	14.58	25.54	9.39	73.46	14.57	68.09
12	IG39_SR7	SilentIntergenicRegion	0	13.42	11.06	23.13	18.13	103.31	19.66	74.01
13	IG39_AR6	ActiveIntergenicRegion	0	18.19	14.37	32.07	25.28	140.57	25.40	81.12
14	IG39_AR5	ActiveIntergenicRegion	0	2.38	1.29	7.98	8.00	15.38	2.23	17.28
15	ER1a	ExonRegion	0	0.15	0.87	0.26	0.00	0.00	0.47	0.60
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	0.00	0.25	0.00	0.00	0.45	0.00	0.19
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	1.22	0.38	0.43	0.42	0.17	0.00	0.85
20	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	0.62	1.88	0.76	4.25	0.00	0.00	2.04
22	E4a_E5a	KnownJunction	0	1.35	0.00	3.19	1.68	0.00	0.00	0.00
23	ER5a	ExonRegion	0	0.45	0.76	2.34	1.96	0.00	2.29	1.25
24	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER6a	ExonRegion	0	0.00	0.00	0.49	0.87	0.00	2.38	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER7a	ExonRegion	0	0.00	0.00	0.54	0.00	0.00	0.24	0.00
28	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER9a	ExonRegion	0	0.44	0.71	0.79	1.47	0.32	0.00	0.39
32	E9a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER10a	ExonRegion	0	2.59	3.69	2.63	3.16	0.99	1.31	3.15
34	E10_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER10b	ExonRegion	0	2.03	3.95	2.36	1.78	0.49	1.51	3.00
36	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER12a	ExonRegion	0	1.34	1.51	0.85	0.77	0.28	0.83	1.26
41	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER13a	ExonRegion	0	1.37	2.14	1.32	2.37	0.14	0.27	2.74