Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MTSS1L	Gene	0	51.91	157.26	48.76	82.07	41.36	78.91	104.50
2	254951	Transcript	0	41.66	122.60	40.51	46.30	48.91	47.90	98.98
3	338779	Transcript	0	44.48	164.07	47.07	88.68	42.59	78.28	118.35
4	ER1a	ExonRegion	0	9.39	45.84	8.85	18.61	6.32	18.73	18.76
5	E1a_E2a	KnownJunction	0	35.75	212.09	39.02	80.49	37.32	81.69	104.35
6	ER2a	ExonRegion	0	39.69	257.59	44.34	100.82	35.71	112.00	122.78
7	E2a_E3a	KnownJunction	0	48.03	288.93	52.65	113.29	38.61	152.79	151.58
8	ER3a	ExonRegion	0	39.61	289.96	47.20	126.55	30.93	147.65	124.04
9	E3a_E4a	KnownJunction	0	41.02	257.20	54.89	135.81	35.99	146.92	141.04
10	ER4a	ExonRegion	0	50.42	317.85	62.08	135.52	37.62	151.43	145.15
11	E4a_E5a	KnownJunction	0	90.83	328.55	98.54	160.54	79.23	175.03	223.61
12	ER5a	ExonRegion	0	107.05	384.75	107.28	167.34	87.08	165.96	247.86
13	E5a_E6a	KnownJunction	0	136.89	426.36	130.05	178.91	96.18	150.86	263.35
14	ER6a	ExonRegion	0	132.34	399.98	121.40	173.14	129.78	164.68	307.24
15	E6a_E7a	KnownJunction	0	33.18	74.19	33.37	40.23	15.12	47.54	71.23
16	E6a_E8a	KnownJunction	0	83.32	245.19	81.02	92.60	97.81	95.81	197.96
17	E7a_E8a	KnownJunction	0	21.05	49.26	23.37	53.34	14.43	27.36	65.31
18	ER7a	ExonRegion	0	44.23	115.14	48.92	72.88	22.05	65.25	124.95
19	ER8a	ExonRegion	0	126.23	358.84	125.68	158.90	94.47	149.01	292.20
20	E8a_E9a	KnownJunction	0	113.74	382.46	111.15	167.88	107.26	148.50	270.98
21	E8a_E10a	NovelJunction	0	2.40	9.98	3.15	18.31	0.00	18.52	7.98
22	ER9a	ExonRegion	0	128.40	351.66	136.89	162.20	131.26	138.83	326.62
23	E9a_E10a	KnownJunction	0	125.79	370.53	138.54	162.74	75.15	147.40	309.89
24	ER10a	ExonRegion	0	115.66	323.67	121.06	160.26	112.36	152.59	286.49
25	E10_Da	KnownBoundary	0	103.14	247.24	101.93	157.18	85.66	144.08	256.32
26	E10a_E15b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER10b	ExonRegion	0	57.91	178.61	68.18	111.57	56.95	100.75	171.91
28	E10b_E11a	KnownJunction	0	30.13	137.27	49.35	89.75	38.87	82.49	115.98
29	E10b_E12a	NovelJunction	0	0.62	9.98	0.78	8.29	0.00	5.31	3.48
30	ER11a	ExonRegion	0	47.51	180.58	57.68	98.10	48.01	77.22	153.66
31	E11_Da	NovelBoundary	1	14.25	9.27	6.28	0.00	0.00	1.66	0.69
32	E11a_E12a	KnownJunction	0	39.62	168.66	67.30	80.57	52.54	61.26	124.71
33	E11a_E13a	NovelJunction	1	0.00	0.00	4.14	1.19	0.00	21.92	14.76
34	I11	Intron	0	26.83	20.12	12.92	12.82	3.69	11.86	4.84
35	I11_SR2	SilentIntronRegion	0	36.20	25.73	17.78	17.77	4.98	17.21	6.76
36	I11_AR2	ActiveIntronRegion	0	14.57	14.67	5.87	5.97	1.55	3.51	2.13
37	E12_Aa	NovelBoundary	1	20.21	11.66	11.22	9.37	2.14	8.44	2.04
38	ER12a	ExonRegion	0	38.74	185.81	45.86	82.90	38.13	62.17	84.24
39	E12a_E13a	KnownJunction	0	61.80	211.77	49.35	120.09	52.45	82.95	129.26
40	ER13a	ExonRegion	0	59.96	205.20	63.58	110.06	58.69	104.38	149.30
41	E13a_E14a	KnownJunction	0	49.57	232.11	43.41	124.65	84.47	122.66	165.23
42	ER14a	ExonRegion	0	67.20	294.41	62.65	146.71	61.96	136.50	175.62
43	E14a_E15a	KnownJunction	0	66.34	294.63	51.76	121.67	59.43	127.94	166.13
44	ER15a	ExonRegion	0	47.91	122.26	41.23	70.58	34.51	69.19	77.14
45	E15_Ab	KnownBoundary	0	0.62	1.05	0.00	1.14	0.00	0.00	1.71
46	ER15b	ExonRegion	0	2.01	8.97	0.34	6.94	1.10	3.57	1.90
47	E15_Da	KnownBoundary	0	2.05	10.90	0.00	8.72	2.14	10.69	0.00
48	ER15c	ExonRegion	0	2.08	11.13	0.00	7.09	1.28	6.50	0.66