Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TAF1C	Gene	0	60.74	46.43	75.68	54.12	83.15	26.69	43.86
2	378541	Transcript	0	62.37	36.98	43.99	27.39	34.45	10.83	34.40
3	341690	Transcript	0	95.05	56.98	135.57	89.18	104.15	31.28	46.86
4	ER1a	ExonRegion	0	23.29	13.49	37.04	19.94	29.72	12.34	15.56
5	E1a_E2a	KnownJunction	0	5.21	6.49	5.49	5.09	4.26	4.69	1.39
6	I1_AR2	ActiveIntronRegion	0	7.50	0.63	16.70	6.61	3.98	2.93	4.35
7	E2_Aa	NovelBoundary	1	3.22	3.26	21.35	1.19	5.44	5.17	7.07
8	ER2a	ExonRegion	0	32.80	25.74	46.34	35.26	40.62	18.34	16.88
9	E2a_E3a	KnownJunction	0	39.97	26.64	56.13	44.13	39.14	18.65	23.30
10	ER3a	ExonRegion	0	38.79	39.45	62.34	48.62	39.96	19.23	28.23
11	E3a_E4a	KnownJunction	0	44.71	46.24	71.79	41.88	66.74	26.05	32.95
12	ER4a	ExonRegion	0	38.30	48.62	65.11	45.76	48.51	31.39	30.81
13	E4a_E5a	KnownJunction	0	42.98	53.36	80.66	50.42	56.89	38.51	46.85
14	ER5a	ExonRegion	0	43.96	50.20	67.67	59.78	49.27	29.83	38.52
15	E5a_E6a	KnownJunction	0	38.65	38.70	59.62	35.52	48.36	31.14	27.04
16	E5a_E7a	NovelJunction	0	1.80	2.73	5.60	7.45	1.08	11.04	1.12
17	E5a_E8b	NovelJunction	1	0.00	0.00	4.57	5.58	0.00	1.21	9.13
18	ER6a	ExonRegion	0	38.95	40.42	70.05	39.82	56.45	20.91	33.44
19	E6a_E7a	KnownJunction	0	37.45	40.14	62.60	38.96	32.14	12.86	26.90
20	ER7a	ExonRegion	0	45.78	36.80	72.66	38.85	55.65	20.55	33.28
21	E7_Da	NovelBoundary	0	6.43	13.42	8.32	5.39	15.26	5.07	4.33
22	E7a_E8a	KnownJunction	0	93.10	49.92	125.05	67.08	80.29	31.41	40.70
23	E8_Aa	NovelBoundary	0	27.94	13.35	22.39	8.91	32.07	3.89	8.57
24	ER8a	ExonRegion	0	131.33	72.07	163.72	97.93	112.89	34.37	76.62
25	E8_Da	KnownBoundary	0	64.21	25.46	43.76	17.15	33.56	8.09	26.66
26	E8a_E8b	KnownJunction	0	95.05	56.98	135.57	89.18	104.15	31.28	46.86
27	ER8b	ExonRegion	0	62.37	36.98	43.99	27.39	34.45	10.83	34.40
28	E8_Ab	KnownBoundary	0	65.22	28.77	35.54	23.57	28.59	11.26	45.46
29	ER8c	ExonRegion	0	107.55	73.50	132.24	107.61	112.14	37.74	74.23
30	E8b_E9a	KnownJunction	0	78.03	53.65	111.79	75.61	73.19	33.47	46.22
31	ER9a	ExonRegion	0	33.97	28.70	58.03	41.27	64.56	18.48	33.98
32	E9_Da	NovelBoundary	0	76.97	64.65	74.06	103.57	71.99	27.04	55.12
33	E9a_E10a	KnownJunction	1	23.83	12.95	44.20	19.02	63.95	1.26	30.44
34	I9	Intron	1	32.10	26.57	30.18	22.08	30.32	15.18	24.23
35	I9_AR1	ActiveIntronRegion	1	32.57	26.95	30.60	22.38	30.67	15.40	24.56
36	E10_Aa	NovelBoundary	0	29.41	25.22	55.66	50.20	38.29	21.04	32.40
37	ER10a	ExonRegion	0	55.56	41.82	100.21	61.85	91.98	22.27	62.85
38	E10a_E11a	KnownJunction	0	55.61	46.42	112.84	75.12	87.85	26.32	70.20
39	ER11a	ExonRegion	0	62.60	60.52	103.44	83.65	85.34	26.78	88.64
40	E11_Da	NovelBoundary	1	16.11	27.24	36.31	21.73	25.98	5.15	18.73
41	E11a_E12a	KnownJunction	0	34.11	19.44	69.55	37.76	57.54	15.17	58.36
42	I11	Intron	0	23.87	22.82	25.85	19.92	32.17	9.58	15.12
43	I11_AR1	ActiveIntronRegion	0	23.94	22.88	25.92	19.97	32.26	9.61	15.16
44	E12_Aa	NovelBoundary	0	47.22	49.63	50.40	28.20	27.73	31.03	22.21
45	ER12a	ExonRegion	0	42.95	58.64	63.47	61.96	80.49	27.71	55.27
46	E12a_E13a	KnownJunction	0	50.49	57.72	60.63	61.36	95.51	29.32	60.92
47	E12a_E14a	NovelJunction	1	0.98	0.00	3.52	13.36	2.05	1.66	2.14
48	ER13a	ExonRegion	0	27.81	43.71	42.95	45.31	60.06	33.46	32.71
49	E13a_E14a	KnownJunction	0	43.69	39.30	48.69	55.81	98.97	42.58	40.99
50	ER14a	ExonRegion	0	70.04	48.90	76.87	54.59	101.31	29.13	44.36