Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC009171.3	Gene	0	44.86	70.04	89.29	56.85	173.15	26.96	109.80
2	318059	Transcript	0	41.00	72.28	79.17	57.64	192.51	26.32	109.28
3	ER1a	ExonRegion	1	25.90	22.53	42.87	19.49	212.35	3.23	43.29
4	E1a_E2a	KnownJunction	0	58.21	46.37	54.18	31.32	293.92	12.92	101.94
5	I1_AR3	ActiveIntronRegion	1	10.07	9.64	9.11	5.49	32.12	8.33	25.40
6	I1_SR4	SilentIntronRegion	0	12.67	7.31	12.88	7.26	29.83	8.50	19.23
7	I1_AR4	ActiveIntronRegion	1	12.11	8.22	12.95	3.23	49.40	4.98	24.76
8	I1_AR5	ActiveIntronRegion	0	11.14	8.05	13.80	2.49	46.77	6.90	21.17
9	I1_AR8	ActiveIntronRegion	1	3.07	3.01	4.11	1.53	18.25	18.43	7.50
10	E2_Aa	NovelBoundary	1	1.65	0.00	2.14	0.00	3.97	17.66	5.69
11	ER2a	ExonRegion	0	32.91	54.17	38.03	36.28	116.88	18.59	82.02
12	E2_Da	NovelBoundary	1	2.24	0.00	4.61	5.88	4.26	35.56	3.63
13	E2a_E3a	KnownJunction	0	18.58	62.03	40.75	61.31	53.85	18.73	77.19
14	I2	Intron	1	2.60	2.99	5.00	2.94	12.12	11.81	10.30
15	I2_AR1	ActiveIntronRegion	1	1.09	0.80	2.39	0.81	5.04	17.43	5.14
16	I2_SR1	SilentIntronRegion	1	2.30	2.01	2.82	1.86	9.51	10.24	10.06
17	E3_Aa	NovelBoundary	0	13.30	15.00	18.39	10.35	22.64	15.60	22.51
18	ER3a	ExonRegion	0	79.09	98.78	150.01	84.31	295.51	45.43	178.83
19	E3a_E4a	KnownJunction	0	66.63	125.92	173.81	85.07	460.57	52.21	229.40
20	I3	Intron	1	1.17	0.48	1.30	2.23	1.39	12.43	2.80
21	I3_SR1	SilentIntronRegion	1	0.98	0.00	0.96	1.96	1.30	12.42	2.55
22	I3_SR2	SilentIntronRegion	1	1.56	1.53	2.05	2.78	1.61	12.27	3.39
23	E4_Aa	NovelBoundary	1	0.68	0.00	3.25	3.60	0.00	14.42	1.95
24	ER4a	ExonRegion	0	37.72	110.55	91.48	89.72	185.41	35.37	126.54
25	E4_Da	NovelBoundary	1	0.65	2.89	4.60	2.98	0.95	17.34	2.06
26	E4a_E5a	KnownJunction	0	17.56	73.35	38.27	65.05	41.31	28.35	58.39
27	I4	Intron	1	0.45	0.54	1.30	0.55	1.35	7.94	1.79
28	I4_AR1	ActiveIntronRegion	1	0.43	0.50	1.37	0.59	1.41	8.06	1.86
29	ER5a	ExonRegion	0	32.44	56.85	83.11	46.18	72.80	22.01	85.91