Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC108134.3	Gene	0	19.12	14.96	2.65	10.50	5.47	16.89	22.25
2	382225	Transcript	0	7.92	5.25	1.29	4.14	3.64	5.35	10.17
3	ER1a	ExonRegion	0	5.14	3.75	0.68	0.05	8.05	0.02	0.67
4	E1_Da	NovelBoundary	0	48.18	17.44	5.32	13.84	19.80	9.11	37.20
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E2_Aa	NovelBoundary	1	70.31	29.08	1.49	8.40	15.26	10.61	39.20
7	ER2a	ExonRegion	0	8.10	2.41	0.01	1.25	6.78	1.23	0.79
8	E2_Da	NovelBoundary	0	66.28	17.16	6.29	6.42	8.44	5.63	26.26
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.60
10	E3_Aa	NovelBoundary	0	124.59	68.57	35.15	25.98	37.18	44.09	58.59
11	ER3a	ExonRegion	1	24.90	11.31	4.92	9.91	14.37	20.73	13.68
12	E3_Da	NovelBoundary	0	83.52	27.74	29.20	33.97	47.63	41.94	49.33
13	E3a_E4a	KnownJunction	0	6.44	1.23	2.51	2.95	0.00	1.34	1.42
14	E3a_E7a	NovelJunction	1	39.74	16.97	24.23	5.17	8.76	15.14	10.30
15	Ix	Intron	0	10.41	5.42	1.00	2.10	2.74	9.54	6.44
16	Ix_SR1	SilentIntronRegion	0	10.49	5.46	1.01	2.11	2.76	9.61	6.48
17	E4_Aa	NovelBoundary	1	101.89	100.15	2.76	5.66	10.42	15.01	32.26
18	ER4a	ExonRegion	0	22.29	17.08	2.60	10.63	3.46	17.19	21.94
19	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	I4	Intron	1	8.27	12.25	1.81	6.28	0.27	10.79	13.10
21	I4_SR1	SilentIntronRegion	1	8.30	12.29	1.82	6.30	0.27	10.82	13.14
22	E5_Aa	NovelBoundary	0	21.81	11.14	6.18	7.21	1.96	12.25	24.42
23	ER5a	ExonRegion	0	13.20	6.39	0.97	8.38	1.03	10.32	28.52
24	E5_Da	NovelBoundary	1	120.84	54.30	69.91	46.79	67.29	53.22	34.42
25	E5a_E6a	KnownJunction	1	3.61	4.20	1.47	1.68	0.00	0.00	24.51
26	E6_Aa	NovelBoundary	1	37.20	15.89	25.08	33.32	42.79	20.96	44.34
27	ER6a	ExonRegion	0	3.53	5.59	1.61	1.86	6.39	0.02	12.91
28	E6_Da	NovelBoundary	0	19.26	4.94	2.67	4.33	9.34	6.35	14.03
29	E6a_E7a	KnownJunction	0	2.69	2.84	0.00	0.00	1.22	0.00	0.79
30	E7_Aa	NovelBoundary	0	2244.75	1797.23	1532.51	1317.33	1169.54	1331.31	1259.23
31	ER7a	ExonRegion	0	8.57	6.83	1.07	12.73	4.39	5.78	14.82
32	E7_Da	NovelBoundary	1	19.86	6.33	2.41	15.71	3.11	18.52	26.58
33	E7a_E8a	KnownJunction	0	1.44	0.00	0.00	0.00	0.00	0.00	2.75
34	I7	Intron	0	8.76	3.08	0.43	4.74	5.53	5.48	7.69
35	I7_SR1	SilentIntronRegion	0	8.82	3.10	0.44	4.78	5.55	5.53	7.76
36	E8_Aa	NovelBoundary	1	4.99	19.26	1.77	8.61	8.35	16.13	17.05
37	ER8a	ExonRegion	0	18.92	17.13	3.57	12.63	8.83	23.59	29.21
38	IG34	Intergenic	0	7.76	5.94	1.12	5.60	2.32	10.29	7.81
39	IG34_SR1	SilentIntergenicRegion	0	8.85	6.47	1.26	6.13	2.47	11.04	8.95