Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CCDC64B	Gene	0	105.31	121.63	4.66	9.07	22.27	16.10	28.59
2	389347	Transcript	0	120.73	132.89	4.14	6.33	26.41	13.59	29.29
3	ER1a	ExonRegion	0	32.69	57.98	2.44	3.77	6.72	6.82	12.44
4	E1_Da	NovelBoundary	0	17.39	4.07	0.00	5.31	8.25	4.61	3.40
5	E1a_E2a	KnownJunction	1	47.02	122.37	0.00	0.00	5.92	8.79	18.87
6	Ix	Intron	0	10.41	5.42	1.00	2.10	2.74	9.54	6.44
7	Ix_SR1	SilentIntronRegion	0	10.49	5.46	1.01	2.11	2.76	9.61	6.48
8	I1	Intron	0	49.64	14.32	3.46	8.72	11.66	8.67	24.57
9	I1_SR1	SilentIntronRegion	0	58.60	14.59	4.25	9.08	18.19	11.64	33.22
10	I1_AR1	ActiveIntronRegion	0	46.29	14.25	3.17	8.59	9.18	7.55	21.30
11	E2_Aa	NovelBoundary	0	23.07	25.27	0.00	2.68	0.00	6.14	13.08
12	ER2a	ExonRegion	0	98.84	132.82	5.49	8.83	18.73	13.22	26.44
13	E2_Da	NovelBoundary	1	5.92	7.64	0.79	9.37	0.00	11.93	14.70
14	E2a_E3a	KnownJunction	0	133.17	141.34	3.89	4.55	29.62	14.69	37.69
15	I2	Intron	1	6.53	7.52	3.35	3.87	0.00	6.11	9.19
16	I2_AR1	ActiveIntronRegion	1	6.63	7.62	3.39	3.93	0.00	6.21	9.33
17	E3_Aa	NovelBoundary	1	14.57	17.68	4.35	23.43	0.00	19.56	25.57
18	ER3a	ExonRegion	0	120.30	169.50	6.50	8.72	28.52	21.96	34.76
19	E3_Da	NovelBoundary	0	20.58	21.73	5.75	31.18	0.00	19.24	24.15
20	E3a_E4a	KnownJunction	1	111.34	159.86	4.66	4.50	28.89	11.79	29.38
21	E4_Aa	NovelBoundary	1	9.88	15.76	3.08	13.71	0.00	15.03	19.63
22	ER4a	ExonRegion	0	133.43	173.77	6.17	12.17	33.44	21.95	47.15
23	E4_Da	NovelBoundary	1	54.63	64.31	4.28	19.75	6.66	22.70	19.65
24	E4a_E5a	KnownJunction	1	69.61	124.03	2.34	0.00	20.17	4.56	26.23
25	I4	Intron	1	56.29	40.78	5.47	12.76	9.62	17.29	23.74
26	I4_AR1	ActiveIntronRegion	1	56.48	40.92	5.49	12.81	9.66	17.35	23.82
27	E5_Aa	NovelBoundary	1	63.46	40.69	4.51	11.38	9.87	13.35	20.28
28	ER5a	ExonRegion	0	88.49	128.73	3.02	10.79	14.95	16.20	34.00
29	E5_Da	NovelBoundary	1	65.84	66.83	2.11	9.59	9.82	14.34	22.07
30	E5a_E6a	KnownJunction	1	80.18	63.10	1.61	1.68	0.00	4.98	9.34
31	I5	Intron	1	6.23	4.81	0.90	4.12	0.00	10.49	7.96
32	I5_SR1	SilentIntronRegion	1	6.73	5.12	0.93	4.42	0.00	11.14	8.45
33	E6_Aa	NovelBoundary	0	8.24	7.91	3.22	9.29	0.00	11.36	15.54
34	ER6a	ExonRegion	0	187.06	131.45	6.36	9.96	32.40	20.87	32.97
35	E6_Da	NovelBoundary	1	46.73	62.71	5.48	18.96	0.00	24.01	25.44
36	E6a_E7a	KnownJunction	1	184.61	124.68	3.28	1.38	41.61	6.14	21.98
37	I6	Intron	1	29.58	31.27	2.81	8.18	0.98	15.51	8.50
38	I6_SR1	SilentIntronRegion	1	29.76	31.45	2.83	8.23	0.98	15.60	8.55
39	E7_Aa	NovelBoundary	1	38.39	37.96	3.08	12.49	1.84	19.72	6.46
40	ER7a	ExonRegion	0	201.10	185.31	7.19	12.82	45.95	18.80	39.75
41	E7_Da	NovelBoundary	0	15.00	14.95	1.18	7.61	0.00	28.65	9.03
42	E7a_E8a	KnownJunction	1	235.38	181.46	5.66	4.17	36.82	14.98	44.14
43	ER8a	ExonRegion	0	120.80	152.21	3.22	7.76	31.06	14.32	26.97
44	E8a_E9a	KnownJunction	0	115.16	112.89	3.94	5.93	54.13	11.82	28.82
45	E9_Aa	NovelBoundary	0	41.07	10.09	2.33	4.80	0.00	5.98	6.39
46	ER9a	ExonRegion	0	93.20	97.60	4.64	10.49	20.04	19.06	26.92
47	IG33	Intergenic	0	35.62	27.47	6.98	4.82	7.68	18.98	13.10
48	IG33_AR1	ActiveIntergenicRegion	0	36.18	27.94	7.07	4.89	7.80	19.29	13.30