Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TSC2 Gene 0 87.65 64.82 81.81 50.29 101.30 34.38 156.55 2 401874 Transcript 0 0 0 0 0 0 0 0 3 353929 Transcript 0 0 0 0 0 0 0 0 4 350773 Transcript 0 0 0 0 0 0 0 0 5 219476 Transcript 0 0 0 0 0 0 0 0 6 382538 Transcript 0 3.02 2.76 1.77 2.33 1.87 1.13 0.00 7 ER1a ExonRegion 0 2.88 0.00 0.00 0.00 0.81 0.00 1.18 8 ER1b ExonRegion 1 36.04 9.00 23.69 11.99 17.52 3.21 21.65 9 E1a_E2a KnownJunction 1 47.92 20.02 36.08 19.67 23.54 7.64 29.94 10 ER2a ExonRegion 0 63.26 47.44 48.98 23.86 28.38 20.21 55.43 11 E2a_E3a KnownJunction 0 113.58 79.58 92.29 31.59 83.45 46.47 88.61 12 ER3a ExonRegion 0 88.14 72.61 77.25 39.70 72.34 29.34 81.71 13 E3a_E4a KnownJunction 0 78.91 56.64 81.94 28.88 45.83 15.30 78.98 14 E3a_E7a KnownJunction 0 3.02 2.76 1.77 2.33 1.87 1.13 0.00 15 ER4a ExonRegion 0 65.99 47.85 53.53 26.50 38.58 15.32 70.22 16 E4a_E5a KnownJunction 0 72.25 38.83 64.05 19.07 57.17 20.74 72.17 17 ER5a ExonRegion 0 98.49 66.43 94.10 49.03 91.80 22.42 131.35 18 E5a_E6a KnownJunction 0 89.44 66.91 80.59 57.89 103.05 23.82 146.87 19 ER6a ExonRegion 0 122.83 82.51 105.76 59.92 104.38 28.16 173.64 20 E6a_E7a KnownJunction 0 107.00 70.33 93.64 43.94 114.32 18.41 166.60 21 ER7a ExonRegion 0 97.31 83.85 86.36 46.65 111.54 27.07 164.75 22 E7a_E8a KnownJunction 0 74.74 82.39 68.93 43.26 113.81 30.74 139.47 23 ER8a ExonRegion 0 79.95 87.38 75.30 60.47 119.29 32.92 164.73 24 E8_Da KnownBoundary 0 77.17 75.19 68.78 62.01 118.35 34.84 165.31 25 ER8b ExonRegion 0 91.78 71.68 63.60 49.30 96.80 24.23 130.46 26 E8b_E9a KnownJunction 0 95.78 75.71 73.86 38.58 88.68 20.74 121.01 27 ER9a ExonRegion 0 66.86 57.98 68.75 42.43 82.16 17.71 114.71 28 E9a_E10a KnownJunction 0 36.28 46.82 55.33 37.28 66.58 28.60 113.42 29 ER10a ExonRegion 0 58.13 54.21 59.64 36.91 72.07 19.07 107.31 30 E10a_E11a KnownJunction 0 65.69 62.24 59.29 32.43 67.59 25.89 108.53 31 E11_Aa NovelBoundary 1 24.53 0.00 24.39 0.00 1.78 0.00 0.00 32 ER11a ExonRegion 0 52.72 78.81 68.98 42.23 74.21 28.46 140.69 33 E11a_E12a KnownJunction 0 52.39 71.48 57.42 37.22 44.95 25.43 150.98 34 ER12a ExonRegion 0 58.43 80.01 79.28 52.63 75.52 34.82 149.38 35 E12a_E13a KnownJunction 0 57.73 63.13 109.04 50.58 68.31 31.44 183.60 36 ER13a ExonRegion 0 64.75 57.55 96.06 46.09 86.79 31.09 163.28 37 E13_Da NovelBoundary 1 5.46 14.71 6.02 3.17 1.15 20.42 5.19 38 E13a_E14a KnownJunction 0 61.84 37.99 95.76 36.09 99.75 23.53 143.36 39 E14_Aa NovelBoundary 0 5.97 6.73 3.38 10.16 1.18 9.54 4.16 40 ER14a ExonRegion 0 80.50 63.07 104.42 53.83 81.00 33.57 175.48 41 E14a_E15a KnownJunction 0 61.60 74.85 102.76 56.81 59.34 33.45 191.85 42 ER15a ExonRegion 0 66.86 65.48 91.66 45.94 76.06 35.41 163.23 43 E15_Da NovelBoundary 1 37.29 3.26 38.54 0.00 0.00 0.00 3.21 44 E15a_E16a KnownJunction 0 91.03 70.85 107.02 62.28 126.15 48.19 202.25 45 ER16a ExonRegion 0 76.06 51.91 79.83 45.58 70.68 32.09 146.21 46 E16a_E17a KnownJunction 0 81.28 51.68 77.27 40.47 87.92 32.96 150.08 47 ER17a ExonRegion 0 72.24 55.87 76.56 50.11 72.76 33.82 149.78 48 E17a_E18a KnownJunction 0 65.37 50.65 60.17 44.59 48.04 25.14 114.06 49 ER18a ExonRegion 0 72.85 50.69 57.29 43.88 59.92 21.87 109.94 50 E18a_E19a KnownJunction 1 86.50 61.45 83.64 42.53 72.16 9.41 119.70 51 ER19a ExonRegion 0 54.73 39.62 53.33 25.15 48.04 15.47 73.61 52 E19a_E20a KnownJunction 0 75.67 63.10 67.51 28.72 47.53 17.50 101.32 53 E20_Aa NovelBoundary 1 39.62 2.57 29.47 3.82 0.00 0.00 3.07 54 ER20a ExonRegion 0 90.94 70.73 83.74 48.55 74.32 36.45 146.45 55 E20a_E21a KnownJunction 0 85.75 76.95 75.59 68.30 75.52 46.12 142.31 56 ER21a ExonRegion 0 96.72 67.79 84.33 63.91 110.26 34.55 178.75 57 E21a_E22a KnownJunction 0 90.64 79.81 92.46 98.29 182.99 34.12 220.63 58 ER22a ExonRegion 0 98.17 87.35 90.11 58.44 130.51 38.01 242.28 59 E22a_E23a KnownJunction 0 94.70 79.29 84.35 52.31 137.56 35.00 197.49 60 ER23a ExonRegion 0 134.17 90.95 135.09 68.56 187.43 64.27 342.97 61 E23a_E24a KnownJunction 0 109.69 69.91 101.18 57.19 138.57 30.36 220.23 62 ER24a ExonRegion 0 120.11 70.30 98.90 64.65 126.46 29.42 212.96 63 E24a_E25a KnownJunction 0 172.42 92.82 138.54 83.79 242.12 56.55 252.02 64 ER25a ExonRegion 0 147.19 67.06 122.40 55.93 148.91 37.14 206.40 65 E25a_E26a KnownJunction 1 40.62 17.39 43.44 20.75 41.52 3.81 54.82 66 E25a_E27a KnownJunction 0 72.50 36.91 50.64 34.19 60.84 16.19 123.25 67 I25_AR2 ActiveIntronRegion 0 19.62 2.78 10.69 0.62 9.92 0.00 4.34 68 ER26a ExonRegion 0 37.98 14.71 46.38 17.31 42.22 5.19 45.56 69 E26a_E27a KnownJunction 1 35.68 12.95 43.64 18.72 34.76 3.94 51.34 70 ER27a ExonRegion 0 156.13 57.72 124.15 61.11 95.12 35.22 171.31 71 E27a_E28a KnownJunction 0 107.73 42.85 91.04 36.68 94.36 28.03 128.09 72 ER28a ExonRegion 0 94.00 36.81 68.85 27.20 68.70 16.65 99.56 73 E28a_E29a KnownJunction 0 53.37 31.92 38.94 16.88 42.37 12.01 84.66 74 ER29a ExonRegion 0 40.50 31.58 35.63 22.77 42.59 13.62 71.66 75 E29a_E30a KnownJunction 0 60.20 39.09 40.94 26.55 57.03 19.43 90.57 76 ER30a ExonRegion 0 57.35 43.40 65.13 32.54 67.39 19.73 102.06 77 E30a_E31a KnownJunction 0 77.04 37.02 86.29 37.93 66.51 23.05 161.79 78 ER31a ExonRegion 0 49.22 47.83 59.77 49.62 73.07 33.16 121.87 79 E31a_E32a KnownJunction 1 4.82 6.83 2.34 3.39 2.31 5.41 12.54 80 E31a_E33a KnownJunction 0 38.74 51.26 34.72 45.22 61.78 27.84 96.68 81 E32_Aa NovelBoundary 0 20.51 13.66 9.69 9.59 10.81 9.51 8.03 82 ER32a ExonRegion 0 5.37 8.31 3.87 4.16 6.54 3.78 10.66 83 E32_Da NovelBoundary 1 15.40 9.04 13.47 14.71 7.26 0.00 11.08 84 E32a_E33a KnownJunction 0 8.09 9.85 6.44 2.65 0.00 5.71 14.45 85 ER33a ExonRegion 0 62.72 56.92 67.53 37.74 79.77 33.79 141.12 86 E33a_E34a KnownJunction 0 56.26 53.91 62.65 50.20 77.55 34.12 132.14 87 ER34a ExonRegion 0 87.55 72.45 86.66 55.21 91.02 40.63 151.43 88 E34a_E35a KnownJunction 0 176.83 132.85 156.18 116.74 206.16 80.35 271.61 89 ER35a ExonRegion 0 106.25 117.54 105.64 94.64 133.67 77.79 219.06 90 E35a_E36a KnownJunction 0 157.87 126.81 138.87 112.46 171.49 87.58 273.46 91 ER36a ExonRegion 0 162.10 110.51 159.32 107.24 282.36 76.55 302.99 92 E36a_E37a KnownJunction 0 161.91 92.90 138.19 76.75 200.33 74.88 297.76 93 ER37a ExonRegion 0 123.24 96.51 111.06 78.33 201.17 68.70 300.16 94 E37a_E38a KnownJunction 0 148.81 113.60 143.98 102.13 335.14 89.19 415.60 95 ER38a ExonRegion 0 185.48 119.85 144.48 99.99 342.97 88.32 371.77 96 E38a_E39a KnownJunction 0 339.34 148.83 214.53 122.78 290.53 95.17 557.25 97 ER39a ExonRegion 0 226.48 137.77 174.04 106.58 301.72 97.02 414.85 98 E39a_E40a KnownJunction 0 203.17 122.87 160.03 92.49 283.27 94.76 287.19 99 ER40a ExonRegion 0 215.15 121.45 154.27 106.34 231.71 78.73 338.98 100 E40a_E41a KnownJunction 0 298.60 158.65 178.97 125.76 387.15 100.07 447.25 101 ER41a ExonRegion 0 127.12 95.58 94.44 76.28 230.39 55.00 222.83 102 E41a_E42a KnownJunction 0 119.68 75.58 88.21 70.95 118.61 59.55 193.53 103 ER42a ExonRegion 0 32.37 28.93 28.84 29.14 41.20 16.52 57.49 104 ER42b ExonRegion 0 4.01 4.45 2.26 3.19 2.07 0.54 2.70