Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WDR61	Gene	0	164.16	91.42	158.01	91.68	385.56	138.57	157.44
2	267973	Transcript	0	149.63	86.47	146.08	81.48	376.30	107.12	150.78
3	IG48_SR1	SilentIntergenicRegion	0	0.00	0.68	0.00	0.54	0.00	15.24	0.00
4	IG48_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.26	4.48	0.00	18.39	0.00
5	ER1a	ExonRegion	0	53.19	27.58	54.92	29.72	231.49	24.55	61.21
6	E1_Da	NovelBoundary	1	0.97	1.63	0.00	5.36	5.58	40.09	2.55
7	E1a_E2a	KnownJunction	0	109.15	62.13	108.28	53.18	502.28	55.77	122.48
8	I1	Intron	1	1.24	5.85	2.59	8.77	2.68	62.27	3.14
9	I1_AR1	ActiveIntronRegion	1	0.00	0.73	0.82	5.07	1.18	39.62	0.49
10	I1_SR1	SilentIntronRegion	1	1.31	8.43	3.52	12.46	0.98	106.65	2.48
11	I1_AR2	ActiveIntronRegion	1	1.23	8.02	2.19	9.41	3.22	60.23	4.05
12	I1_SR2	SilentIntronRegion	1	1.37	0.39	1.88	3.36	5.39	38.40	1.71
13	I1_AR4	ActiveIntronRegion	1	1.71	3.75	2.96	7.49	4.49	32.47	4.70
14	E2_Aa	NovelBoundary	1	5.32	4.81	4.05	17.15	4.29	66.06	5.39
15	ER2a	ExonRegion	0	83.80	53.53	82.89	47.92	294.74	50.29	101.43
16	E2_Da	NovelBoundary	1	1.49	2.68	0.76	8.70	5.90	44.51	4.57
17	E2a_E3a	KnownJunction	0	25.02	30.05	31.21	29.94	124.14	34.97	33.26
18	I2	Intron	1	1.46	1.50	2.04	4.31	2.55	35.55	1.58
19	I2_AR1	ActiveIntronRegion	1	1.46	1.51	2.04	4.33	2.56	35.65	1.58
20	E3a_E4a	KnownJunction	1	6.44	51.23	11.38	30.69	32.48	42.93	21.63
21	ER3a	ExonRegion	0	27.58	60.05	32.47	38.83	73.87	54.99	47.49
22	I3	Intron	1	4.24	4.87	5.09	9.21	7.12	63.11	6.78
23	I3_AR1	ActiveIntronRegion	1	4.16	4.33	4.43	11.15	5.84	66.62	6.07
24	I3_SR1	SilentIntronRegion	1	4.65	6.03	6.02	8.16	8.85	67.15	8.53
25	I3_AR2	ActiveIntronRegion	1	3.27	3.56	5.17	3.67	7.41	33.50	4.26
26	E4_Aa	NovelBoundary	1	8.04	3.78	4.08	2.68	11.53	40.98	10.23
27	ER4a	ExonRegion	0	76.76	86.63	90.33	67.09	125.70	102.37	106.46
28	E4_Da	NovelBoundary	1	1.40	0.00	0.63	2.63	0.00	41.51	8.40
29	E4a_E5a	KnownJunction	0	170.92	95.73	172.29	65.34	288.90	96.69	182.60
30	I4_SR1	SilentIntronRegion	1	1.65	3.16	2.08	0.08	2.31	29.95	3.87
31	E5_Aa	NovelBoundary	1	9.20	13.37	16.83	11.38	4.29	52.77	4.44
32	ER5a	ExonRegion	0	145.39	99.16	135.40	95.50	463.26	129.15	161.13
33	E5_Da	NovelBoundary	1	4.44	4.05	12.07	4.06	8.37	42.80	5.17
34	E5a_E6a	KnownJunction	0	204.54	107.74	185.92	124.05	549.83	129.34	178.44
35	I5	Intron	1	7.43	6.08	10.77	6.67	9.18	38.29	10.13
36	I5_AR1	ActiveIntronRegion	1	9.35	7.39	11.56	6.10	9.94	34.47	10.03
37	I5_SR1	SilentIntronRegion	1	5.56	8.27	12.58	8.06	7.43	30.32	7.00
38	I5_AR2	ActiveIntronRegion	1	7.71	4.76	9.50	7.79	10.90	45.77	10.01
39	I5_AR3	ActiveIntronRegion	1	6.43	6.32	12.18	7.19	8.07	45.73	13.42
40	E6_Aa	NovelBoundary	1	5.77	4.12	8.64	5.50	6.20	45.88	5.92
41	ER6a	ExonRegion	0	314.77	123.01	278.49	156.87	646.89	177.96	217.15
42	E6_Da	NovelBoundary	1	3.55	4.02	3.23	3.71	5.42	58.85	1.75
43	E6a_E7a	KnownJunction	0	196.97	101.64	200.25	101.56	569.22	113.52	167.38
44	I6	Intron	1	1.39	4.66	2.09	5.56	3.10	30.45	1.94
45	I6_SR1	SilentIntronRegion	1	1.46	5.02	2.25	5.85	3.20	32.66	2.11
46	E7_Aa	NovelBoundary	1	0.00	0.00	4.91	4.90	3.14	40.71	6.16
47	ER7a	ExonRegion	0	211.88	99.01	225.66	93.18	597.76	122.33	201.99
48	E7_Da	NovelBoundary	1	2.07	4.36	0.89	3.85	0.00	39.40	0.00
49	E7a_E8a	KnownJunction	0	236.08	89.95	229.85	81.30	641.51	87.31	230.16
50	I7	Intron	1	1.81	4.13	2.49	6.11	1.58	49.90	3.47
51	I7_SR1	SilentIntronRegion	1	1.70	2.80	2.15	4.78	1.39	35.01	2.56
52	I7_AR1	ActiveIntronRegion	1	2.99	3.01	3.37	7.35	1.98	46.39	5.24
53	I7_AR2	ActiveIntronRegion	1	4.21	4.79	3.20	5.75	2.45	44.85	4.25
54	I7_SR2	SilentIntronRegion	1	1.62	5.30	2.65	7.16	1.64	63.17	4.03
55	E8_Aa	NovelBoundary	1	1.03	8.83	5.59	11.84	2.24	72.47	4.70
56	ER8a	ExonRegion	0	181.60	97.56	163.72	78.55	473.88	121.76	191.42
57	E8_Da	NovelBoundary	1	0.00	13.71	0.62	9.35	1.13	38.22	2.36
58	E8a_E9a	KnownJunction	0	157.34	99.46	156.25	80.76	445.06	129.55	185.18
59	I8	Intron	1	1.77	4.36	1.75	7.98	1.03	50.26	2.22
60	I8_SR1	SilentIntronRegion	1	1.19	6.28	1.62	4.23	1.51	52.43	2.80
61	I8_AR1	ActiveIntronRegion	1	1.69	4.25	1.83	7.08	1.39	45.02	2.46
62	I8_AR2	ActiveIntronRegion	1	2.10	3.77	1.69	10.55	0.41	55.89	1.73
63	ER9a	ExonRegion	0	192.39	106.41	184.01	96.93	456.42	143.53	217.36
64	E9_Da	NovelBoundary	1	2.02	1.63	2.31	10.97	1.18	41.54	1.10
65	E9a_E10a	KnownJunction	0	186.49	107.50	185.36	97.42	432.17	120.97	210.27
66	I9	Intron	1	10.16	4.99	6.48	12.25	2.82	51.36	3.66
67	I9_AR1	ActiveIntronRegion	1	10.19	5.00	6.50	12.28	2.83	51.49	3.67
68	E10_Aa	NovelBoundary	1	8.75	9.30	8.45	17.37	5.90	58.69	4.23
69	ER10a	ExonRegion	0	217.58	121.02	198.28	119.61	456.07	175.18	225.03
70	E10_Da	NovelBoundary	1	4.39	5.04	1.38	19.61	2.07	90.58	2.31
71	E10a_E11a	KnownJunction	0	218.45	124.08	211.62	142.85	273.75	161.01	192.34
72	I10	Intron	1	1.24	4.24	2.37	7.06	1.10	53.46	1.66
73	I10_AR1	ActiveIntronRegion	1	1.24	4.24	2.37	7.07	1.10	53.52	1.66
74	E11_Aa	NovelBoundary	1	7.04	5.52	4.84	5.69	3.92	83.64	2.62
75	ER11a	ExonRegion	0	125.88	72.44	129.14	79.84	222.93	175.23	111.92
76	IG47	Intergenic	0	4.31	22.04	6.84	36.48	1.19	202.86	0.32
77	IG47_SR4	SilentIntergenicRegion	0	4.39	26.94	7.84	40.35	1.28	238.98	0.22
78	IG47_AR2	ActiveIntergenicRegion	0	8.71	17.01	11.85	50.50	0.81	222.93	0.67
79	IG47_SR3	SilentIntergenicRegion	0	5.78	13.43	5.93	37.76	1.41	156.34	0.84