Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDE8A	Gene	0	270.34	227.16	99.58	65.97	39.85	195.87	102.14
2	310298	Transcript	0	3.64	2.31	1.43	0.42	0.78	2.92	0.90
3	339708	Transcript	0	21.68	61.00	5.99	11.81	0.00	49.04	14.65
4	356472	Transcript	0	0	0	0	0	0	0	0
5	394553	Transcript	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.00	0.04	0.00	0.00	0.00	0.04	0.00
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	15.17	47.41	4.03	17.17	1.25	48.24	7.61
9	E2a_E3a	KnownJunction	0	92.43	152.11	25.71	51.53	10.97	110.36	37.45
10	ER3a	ExonRegion	0	140.70	183.12	39.56	58.17	13.84	154.41	55.53
11	E3a_E4a	KnownJunction	0	149.69	204.39	51.37	63.85	13.76	188.78	65.05
12	ER4a	ExonRegion	0	417.38	328.11	107.16	94.83	42.54	245.24	108.51
13	E4a_E5a	KnownJunction	0	593.21	302.02	154.71	77.21	47.74	156.56	117.70
14	E4a_E7a	NovelJunction	0	21.66	59.79	12.90	26.93	2.21	89.19	7.21
15	E4a_E10a	NovelJunction	1	0.00	0.00	1.18	3.25	0.00	12.33	0.00
16	ER5a	ExonRegion	0	605.62	312.07	145.95	97.53	45.20	171.51	139.31
17	E5a_E6a	KnownJunction	0	489.60	264.76	106.99	76.72	53.67	148.26	119.87
18	E5a_E7a	NovelJunction	0	12.45	5.04	2.00	4.55	0.00	13.48	0.60
19	ER6a	ExonRegion	0	533.69	288.69	137.50	71.28	62.74	168.61	123.33
20	E6a_E7a	KnownJunction	0	426.96	248.16	127.78	66.83	57.15	142.57	101.91
21	ER7a	ExonRegion	0	356.50	253.32	116.48	62.22	39.34	150.10	98.42
22	E7a_E8a	KnownJunction	0	222.48	237.70	105.38	57.19	24.62	97.42	82.18
23	E7a_E10a	NovelJunction	0	15.67	24.01	6.48	4.66	3.11	30.87	2.28
24	ER8a	ExonRegion	0	262.86	227.22	109.02	60.80	23.35	127.67	94.37
25	E8a_E9a	KnownJunction	0	211.06	141.63	101.20	36.71	19.20	75.76	88.25
26	E8a_E10a	KnownJunction	0	21.68	61.00	5.99	11.81	0.00	49.04	14.65
27	I8_AR1	ActiveIntronRegion	1	29.36	48.28	10.31	5.24	2.47	28.27	1.94
28	ER9a	ExonRegion	0	270.29	198.12	115.31	56.25	31.26	119.50	104.29
29	E9a_E10a	KnownJunction	0	304.66	224.59	133.30	63.58	27.16	141.96	112.10
30	E10_Aa	NovelBoundary	1	85.17	50.99	35.44	9.48	14.50	34.20	9.70
31	ER10a	ExonRegion	0	427.66	341.27	155.77	92.71	53.57	241.65	154.95
32	E10a_E11a	KnownJunction	0	317.56	311.45	130.21	91.00	51.06	226.48	160.41
33	ER11a	ExonRegion	0	355.98	333.36	151.24	101.46	54.91	264.65	189.28
34	E11a_E12a	KnownJunction	0	296.00	278.03	123.41	86.45	46.71	229.78	145.15
35	ER12a	ExonRegion	0	330.52	339.71	138.94	100.71	43.45	246.77	174.77
36	E12a_E13a	KnownJunction	0	252.99	274.85	109.32	75.26	39.60	168.22	133.76
37	E13_Aa	NovelBoundary	1	143.47	8.07	56.19	5.12	4.47	12.22	5.13
38	ER13a	ExonRegion	0	276.49	327.72	129.89	81.26	51.85	208.31	176.74
39	E13a_E14a	KnownJunction	0	291.56	334.91	144.01	89.43	73.01	243.80	175.95
40	ER14a	ExonRegion	0	278.69	300.94	129.22	101.88	63.43	229.43	165.13
41	E14a_E15a	KnownJunction	0	266.05	276.38	116.95	98.58	61.57	199.12	136.92
42	ER15a	ExonRegion	0	331.03	311.22	154.98	88.41	58.94	237.93	154.87
43	E15a_E16a	KnownJunction	0	313.45	324.11	148.93	86.47	46.54	228.95	134.77
44	ER16a	ExonRegion	0	330.11	348.56	144.32	83.93	53.75	258.81	133.73
45	E16a_E17a	KnownJunction	0	282.39	311.11	113.27	62.96	54.73	241.68	105.52
46	ER17a	ExonRegion	0	293.03	297.36	134.71	71.69	53.06	244.81	133.77
47	E17a_E18a	KnownJunction	0	169.80	223.28	93.32	72.01	23.88	171.81	86.02
48	E17a_E19a	NovelJunction	0	4.94	5.91	3.00	1.35	0.00	14.20	1.26
49	E17a_E20a	NovelJunction	0	2.79	5.36	0.89	1.63	1.04	17.31	0.75
50	E17a_E21a	NovelJunction	0	0.77	4.41	3.66	1.25	0.00	8.58	0.00
51	E18_Aa	NovelBoundary	1	79.64	1.21	49.99	1.54	2.28	2.44	2.68
52	ER18a	ExonRegion	0	230.33	286.35	110.99	67.06	46.06	225.71	126.99
53	E18a_E19a	KnownJunction	0	185.48	251.02	73.81	37.28	20.47	184.33	114.74
54	E18a_E21a	NovelJunction	1	1.03	2.26	0.00	0.00	0.99	14.39	0.00
55	ER19a	ExonRegion	0	261.24	292.44	105.46	69.21	42.47	202.95	116.60
56	E19a_E20a	KnownJunction	0	363.44	260.72	126.65	73.53	55.33	204.13	106.01
57	E19a_E21a	NovelJunction	0	5.79	4.10	6.39	9.35	0.00	15.65	2.42
58	ER20a	ExonRegion	0	349.55	351.07	140.25	86.36	55.54	269.94	132.63
59	E20a_E21a	KnownJunction	0	388.86	338.56	134.71	70.41	30.50	257.76	112.23
60	ER21a	ExonRegion	0	329.12	312.64	135.08	79.33	62.65	259.61	126.88
61	E21a_E22a	KnownJunction	0	262.23	246.64	125.25	65.94	93.80	254.65	100.09
62	ER22a	ExonRegion	0	374.89	352.25	166.69	97.67	66.15	342.35	154.79
63	E22a_E23a	KnownJunction	0	353.86	395.88	179.47	110.75	64.09	376.75	144.68
64	ER23a	ExonRegion	0	264.01	170.66	86.28	60.85	38.14	202.03	88.13
65	ER23b	ExonRegion	0	10.93	6.88	4.29	1.25	2.34	8.72	2.70