Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DIS3L Gene 0 30.30 8.15 24.88 4.96 132.23 9.08 43.85 2 319194 Transcript 0 36.87 7.37 26.51 5.92 136.62 9.11 44.38 3 319212 Transcript 0 0.95 1.82 1.78 0.90 9.06 0.79 2.91 4 ER1a ExonRegion 0 0.90 0.00 2.00 0.00 7.39 0.00 1.48 5 E1a_E3a KnownJunction 0 1.75 0.00 4.47 0.00 12.84 0.00 3.15 6 ER2a ExonRegion 0 1.57 1.25 3.89 1.02 12.42 0.47 3.13 7 E2a_E3a KnownJunction 0 0.68 4.18 1.18 1.68 12.84 1.42 4.94 8 ER3a ExonRegion 0 16.73 4.90 15.61 2.79 83.31 11.18 29.74 9 E3a_E4a KnownJunction 0 18.89 7.43 19.59 2.76 77.07 11.71 41.32 10 ER4a ExonRegion 0 18.87 13.00 16.50 1.29 102.54 12.19 43.58 11 E4a_E5a KnownJunction 0 26.20 14.97 21.47 1.30 115.66 8.20 57.31 12 E5_Aa NovelBoundary 1 11.32 0.00 7.04 0.00 0.00 0.00 0.00 13 ER5a ExonRegion 0 23.14 11.61 23.07 2.20 120.76 11.12 50.17 14 E5a_E6a KnownJunction 0 25.60 7.01 23.75 4.58 118.68 5.71 51.51 15 ER6a ExonRegion 0 25.33 6.22 20.17 4.12 102.51 8.10 43.77 16 E6a_E7a KnownJunction 0 29.12 7.46 24.67 1.60 115.61 4.02 45.27 17 ER7a ExonRegion 0 28.24 6.61 17.81 1.07 107.42 2.53 42.70 18 E7a_E8a KnownJunction 0 24.12 6.33 17.69 3.01 95.42 10.69 38.57 19 ER8a ExonRegion 0 22.32 4.60 18.09 1.30 103.03 8.62 51.80 20 E8a_E9a KnownJunction 1 10.90 6.07 16.38 4.23 102.98 3.56 52.04 21 ER9a ExonRegion 0 33.65 8.10 24.25 4.65 147.14 9.67 48.75 22 E9a_E10a KnownJunction 0 45.75 4.47 26.84 2.87 196.00 5.74 57.14 23 ER10a ExonRegion 0 71.82 7.07 44.04 3.23 234.21 9.38 57.54 24 E10a_E11a KnownJunction 0 68.46 2.94 40.57 1.03 264.07 5.49 68.52 25 ER11a ExonRegion 0 50.21 4.94 38.10 2.25 219.43 4.75 59.60 26 E11a_E12a KnownJunction 0 34.98 6.78 37.95 1.30 180.96 3.89 50.16 27 ER12a ExonRegion 0 21.46 6.04 35.76 2.19 187.74 2.56 64.44 28 E12a_E13a KnownJunction 1 18.31 4.83 26.82 0.00 167.53 5.71 58.62 29 ER13a ExonRegion 0 27.34 8.23 28.60 5.72 146.47 7.12 61.97 30 E13_Da KnownBoundary 0 0.00 0.00 0.00 0.00 2.01 0.00 2.52 31 E13a_E14a KnownJunction 0 38.69 4.36 36.50 10.92 157.94 1.55 74.17 32 ER13b ExonRegion 0 0.60 0.02 0.26 0.00 1.92 0.47 0.64 33 ER14a ExonRegion 0 27.27 8.27 22.78 5.86 119.54 5.61 46.86 34 E14a_E15a KnownJunction 0 30.99 7.75 22.30 8.70 167.25 10.77 49.63 35 ER15a ExonRegion 0 36.43 8.55 31.40 7.79 156.59 11.36 55.76 36 E15a_E16a KnownJunction 0 39.47 8.62 26.67 1.46 131.52 6.70 43.73 37 E16_Aa NovelBoundary 0 5.52 2.94 5.30 1.68 28.08 13.00 4.92 38 ER16a ExonRegion 0 47.83 8.99 35.01 4.90 176.63 18.99 56.03 39 E16_Da NovelBoundary 0 4.82 7.04 6.55 4.23 26.56 11.39 5.25 40 E16a_E17a KnownJunction 0 59.37 7.20 36.66 5.55 169.51 12.27 58.49 41 I16 Intron 0 1.64 2.36 4.40 1.21 34.77 2.15 4.21 42 I16_AR1 ActiveIntronRegion 0 0.49 2.13 2.48 1.67 32.11 2.20 3.81 43 I16_AR4 ActiveIntronRegion 0 2.47 3.00 6.39 0.90 44.77 2.22 4.82 44 E17_Aa NovelBoundary 0 6.53 4.20 11.02 3.74 53.57 4.74 12.48 45 ER17a ExonRegion 0 73.67 12.52 48.13 13.72 232.00 19.10 65.15 46 E17_Da NovelBoundary 1 31.34 2.76 22.37 3.66 75.27 2.89 11.02 47 E17a_E18a KnownJunction 0 58.41 10.01 29.00 4.12 182.92 10.99 45.99 48 I17 Intron 0 1.05 0.00 3.27 0.00 35.32 1.00 3.80 49 I17_AR1 ActiveIntronRegion 0 1.07 0.00 3.32 0.00 36.02 1.02 3.85 50 E18_Aa NovelBoundary 0 6.79 3.07 9.02 2.74 73.65 1.66 10.56 51 ER18a ExonRegion 0 27.66 12.18 23.26 8.04 125.29 11.97 32.12 52 IG12 Intergenic 0 3.44 1.73 7.20 3.57 36.66 2.69 5.95 53 IG12_SR1 SilentIntergenicRegion 0 2.21 0.63 4.83 2.18 27.14 2.01 4.26 54 IG12_AR1 ActiveIntergenicRegion 0 5.32 3.43 7.27 8.95 59.53 4.10 9.20 55 IG12_SR2 SilentIntergenicRegion 0 2.41 2.19 3.73 2.46 30.45 1.42 6.33 56 IG12_AR2 ActiveIntergenicRegion 0 6.29 3.11 20.06 0.93 43.19 4.09 7.27